RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 MYOM1P52179 1685 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 EIF4A1P60842 406 aaKnown RBP11.62□□□□□ -0.55
CSTF1-201ENST00000217109 ARHGEF10O15013 1369 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
CSTF1-201ENST00000217109 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
CSTF1-201ENST00000217109 DIP2CQ9Y2E4 1556 aa11.61□□□□□ -0.55
CSTF1-201ENST00000217109 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
CSTF1-201ENST00000217109 FSD2A1L4K1 749 aa11.61□□□□□ -0.55
CSTF1-201ENST00000217109 RNMTO43148 476 aaKnown RBP11.61□□□□□ -0.55
CSTF1-201ENST00000217109 HCLS1P14317 486 aaPredicted RBP11.61□□□□□ -0.55
CSTF1-201ENST00000217109 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
CSTF1-201ENST00000217109 IGSF1Q8N6C5 1336 aa11.61□□□□□ -0.55
CSTF1-201ENST00000217109 ANKRD1Q15327 319 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 SPATA32Q96LK8 384 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 TRIM5Q9C035 493 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 NRDCO43847 1150 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 GIMAP6Q6P9H5 292 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 ZBTB3Q9H5J0 574 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 LETM1O95202 739 aaPredicted RBP11.6□□□□□ -0.55
CSTF1-201ENST00000217109 LRRC2Q9BYS8 371 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 BICC1Q9H694 974 aaKnown RBP11.6□□□□□ -0.55
CSTF1-201ENST00000217109 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 CCDC192P0DO97 292 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
CSTF1-201ENST00000217109 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
CSTF1-201ENST00000217109 PIK3C2BO00750 1634 aa11.6□□□□□ -0.55
CSTF1-201ENST00000217109 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 CCDC183Q5T5S1 534 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 CCDC73Q6ZRK6 1079 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 RALYLQ86SE5 291 aaKnown RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 MED14O60244 1454 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 SGSM2O43147 1006 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 ZNF830Q96NB3 372 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 SDF4Q9BRK5 362 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 ALDH1L1O75891 902 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 TRDNQ13061 729 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 NMIQ13287 307 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 SSH3Q8TE77 659 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 SH2B1Q9NRF2 756 aaPredicted RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 TMEM63CQ9P1W3 806 aa11.59□□□□□ -0.55
CSTF1-201ENST00000217109 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
CSTF1-201ENST00000217109 SYT1P21579 422 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 SNX14Q9Y5W7 946 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 NDUFB9Q9Y6M9 179 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
CSTF1-201ENST00000217109 IFNL2Q8IZJ0 200 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 NUP62CLQ9H1M0 184 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
CSTF1-201ENST00000217109 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
CSTF1-201ENST00000217109 FAM227BQ96M60 508 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 SNRKQ9NRH2 765 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 CEP126Q9P2H0 1117 aa11.58□□□□□ -0.56
CSTF1-201ENST00000217109 GOLIM4O00461 696 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-201ENST00000217109 PROSER3Q2NL68 480 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 CCDC57Q2TAC2 916 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 CPS1P31327 1500 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 CCT2P78371 535 aaKnown RBP11.57□□□□□ -0.56
CSTF1-201ENST00000217109 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
CSTF1-201ENST00000217109 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
CSTF1-201ENST00000217109 ZC3H13Q5T200 1668 aaKnown RBP11.56□□□□□ -0.56
CSTF1-201ENST00000217109 TPM2P07951 284 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
CSTF1-201ENST00000217109 ME1P48163 572 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 EDC3Q96F86 508 aaKnown RBP11.56□□□□□ -0.56
CSTF1-201ENST00000217109 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 UQCRHLA0A096LP55 91 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 UQCRHP07919 91 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 UBE2HP62256 183 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 KRT32Q14532 448 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 CCDC158Q5M9N0 1113 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 GPT2Q8TD30 523 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSTF1-201ENST00000217109 PLEKHG1Q9ULL1 1385 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 PPLO60437 1756 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 MYO3AQ8NEV4 1616 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 TTC41PQ6P2S7 1318 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 F13A1P00488 732 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
CSTF1-201ENST00000217109 HSPA4P34932 840 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
CSTF1-201ENST00000217109 KAT6BQ8WYB5 2073 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
CSTF1-201ENST00000217109 SETD1BQ9UPS6 1966 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms