RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 FBXO18Q8NFZ0 1043 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 DDX11Q96FC9 970 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 TCEANC2Q96MN5 208 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 EPC1Q9H2F5 836 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 YY1AP1Q9H869 796 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 BRMS1Q9HCU9 246 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 TRPM1Q7Z4N2 1603 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 ERLIN1O75477 346 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 FBLN1P23142 703 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 ACTN2P35609 894 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 MAP2K2P36507 400 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 HSP90AB3PQ58FF7 597 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 PLXNC1O60486 1568 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
SUPT16H-201ENST00000216297 NPHP3Q7Z494 1330 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 ZNF446Q9NWS9 450 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 MTMR6Q9Y217 621 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 FHOD1Q9Y613 1164 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 IQGAP2Q13576 1575 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 A0A087WWV3 80 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 SOX12O15370 315 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 CAVIN2O95810 425 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 ADAM21Q9UKJ8 722 aa10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 NUP153P49790 1475 aaKnown RBP10.21□□□□□ -0.77
SUPT16H-201ENST00000216297 EIF2AK4Q9P2K8 1649 aaKnown RBP10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 WDR62O43379 1518 aa10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 BIN1O00499 593 aa10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 NR1I2O75469 434 aa10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 TDRD7Q8NHU6 1098 aaKnown RBP10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 ISM2Q6H9L7 571 aa10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 CLSTN2Q9H4D0 955 aa10.21□□□□□ -0.78
SUPT16H-201ENST00000216297 EIF4G3O43432 1585 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 ERCC4Q92889 916 aaPredicted RBP10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 CEP170Q5SW79 1584 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 CCDC150Q8NCX0 1101 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 ZNF622Q969S3 477 aaKnown RBP eCLIP10.2□□□□□ -0.781e-6■■□□□ 14.3
SUPT16H-201ENST00000216297 PLEKHA4Q9H4M7 779 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 RGS12O14924 1447 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 RAB11FIP3O75154 756 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 CFAP100Q494V2 611 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 PLA2G4DQ86XP0 818 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 IFNKQ9P0W0 207 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 ELP1O95163 1332 aa10.2□□□□□ -0.78
SUPT16H-201ENST00000216297 GUCY2CP25092 1073 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 MUM1L1Q5H9M0 696 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 CDC37L1Q7L3B6 337 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 JPH4Q96JJ6 628 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 CFAP45Q9UL16 551 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 PLB1Q6P1J6 1458 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 ZSCAN12O43309 604 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 RUFY3Q7L099 469 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 CNPY4Q8N129 248 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 PPP1R13BQ96KQ4 1090 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 MAGEA9P43362 315 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 CENPHQ9H3R5 247 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 ABCC4O15439 1325 aa10.19□□□□□ -0.78
SUPT16H-201ENST00000216297 SYNMO15061 1565 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 EIF3CLB5ME19 914 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 ETF1P62495 437 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 EIF3CQ99613 913 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 NOS1P29475 1434 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CALRP27797 417 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 MRFAP1L1Q96HT8 127 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PSMA5P28066 241 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 NOP2P46087 812 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CCDC12Q8WUD4 166 aaPredicted RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 EXOC4Q96A65 974 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CFAP74Q9C0B2 1584 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 ARHGAP31Q2M1Z3 1444 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 BLOC1S2Q6QNY1 142 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 LEO1Q8WVC0 666 aaPredicted RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PLEKHF1Q96S99 279 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PDE11AQ9HCR9 933 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 PUF60Q9UHX1 559 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CEP83Q9Y592 693 aa10.18□□□□□ -0.78
SUPT16H-201ENST00000216297 CTAGE5O15320 804 aa10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 GNAI3P08754 354 aa10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 CCDC172P0C7W6 258 aa10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 H2AFXP16104 143 aaPredicted RBP10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 HSPA4P34932 840 aa10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 LRRFIP1Q32MZ4 808 aaKnown RBP10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 SIL1Q9H173 461 aa10.17□□□□□ -0.78
SUPT16H-201ENST00000216297 PTPRCP08575 1304 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms