RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 UQCRHP07919 91 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 ZNF287Q9HBT7 754 aa21.95■■□□□ 1.1
MBD3-201ENST00000156825 PA2G4Q9UQ80 394 aaKnown RBP21.95■■□□□ 1.1
MBD3-201ENST00000156825 FAM193AP78312 1265 aa21.94■■□□□ 1.1
MBD3-201ENST00000156825 EPB41L2O43491 1005 aaKnown RBP21.94■■□□□ 1.1
MBD3-201ENST00000156825 LUC7LQ9NQ29 371 aaKnown RBP21.94■■□□□ 1.1
MBD3-201ENST00000156825 NLRP5P59047 1200 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 RBM27Q9P2N5 1060 aaKnown RBP21.93■■□□□ 1.1
MBD3-201ENST00000156825 ATP10BO94823 1461 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 H0YHG0 523 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 ARHGAP29Q52LW3 1261 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 FSIP1Q8NA03 581 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 HMGB1P09429 215 aaKnown RBP21.93■■□□□ 1.1
MBD3-201ENST00000156825 TMEM67Q5HYA8 995 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 CPLX3Q8WVH0 158 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 MTHFSDQ2M296 383 aaKnown RBP21.93■■□□□ 1.1
MBD3-201ENST00000156825 CCDC183Q5T5S1 534 aa21.93■■□□□ 1.1
MBD3-201ENST00000156825 WDR78Q5VTH9 848 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 LMBR1LQ6UX01 489 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 STX6O43752 255 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 NEFHP12036 1026 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 SSRP1Q08945 709 aaKnown RBP21.92■■□□□ 1.1
MBD3-201ENST00000156825 KIAA1328Q86T90 577 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 NEK1Q96PY6 1258 aa21.92■■□□□ 1.1
MBD3-201ENST00000156825 BRF1Q92994 677 aa21.91■■□□□ 1.1
MBD3-201ENST00000156825 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
MBD3-201ENST00000156825 MYO6Q9UM54 1294 aa21.91■■□□□ 1.1
MBD3-201ENST00000156825 WWC3Q9ULE0 1092 aa21.91■■□□□ 1.1
MBD3-201ENST00000156825 PPIP5K1Q6PFW1 1433 aa21.91■■□□□ 1.1
MBD3-201ENST00000156825 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
MBD3-201ENST00000156825 RLBP1P12271 317 aa21.91■■□□□ 1.1
MBD3-201ENST00000156825 SFPQP23246 707 aaKnown RBP eCLIP21.91■■□□□ 1.19e-7■■□□□ 14
MBD3-201ENST00000156825 CCDC194A0A1B0GVG4 234 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 RDXP35241 583 aaKnown RBP21.9■■□□□ 1.1
MBD3-201ENST00000156825 DNA2P51530 1060 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 TBC1D32Q96NH3 1257 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 ANO10Q9NW15 660 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 TSPY2A6NKD2 308 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 NUCB1Q02818 461 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 CDC5LQ99459 802 aaKnown RBP21.9■■□□□ 1.1
MBD3-201ENST00000156825 IARSP41252 1262 aaKnown RBP21.9■■□□□ 1.1
MBD3-201ENST00000156825 NFATC2IPQ8NCF5 419 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 CNNM3Q8NE01 707 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 RNF41Q9H4P4 317 aaPredicted RBP21.9■■□□□ 1.1
MBD3-201ENST00000156825 IL16Q14005 1332 aa21.9■■□□□ 1.1
MBD3-201ENST00000156825 SSR1P43307 286 aaKnown RBP21.89■■□□□ 1.1
MBD3-201ENST00000156825 CATIPQ7Z7H3 387 aa21.89■■□□□ 1.1
MBD3-201ENST00000156825 TMX1Q9H3N1 280 aa21.89■■□□□ 1.1
MBD3-201ENST00000156825 PDE1AP54750 535 aa21.89■■□□□ 1.09
MBD3-201ENST00000156825 CARD14Q9BXL6 1004 aa21.89■■□□□ 1.09
MBD3-201ENST00000156825 TSPYL1Q9H0U9 437 aa21.89■■□□□ 1.09
MBD3-201ENST00000156825 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
MBD3-201ENST00000156825 KRI1Q8N9T8 703 aaKnown RBP21.88■■□□□ 1.09
MBD3-201ENST00000156825 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.09
MBD3-201ENST00000156825 RFC4P35249 363 aa21.88■■□□□ 1.09
MBD3-201ENST00000156825 TRMT1Q9NXH9 659 aaKnown RBP21.88■■□□□ 1.09
MBD3-201ENST00000156825 HSPA2P54652 639 aa21.88■■□□□ 1.09
MBD3-201ENST00000156825 ZSCAN30Q86W11 494 aa21.88■■□□□ 1.09
MBD3-201ENST00000156825 SLC26A6Q9BXS9 759 aa21.88■■□□□ 1.09
MBD3-201ENST00000156825 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 NBPF5PQ86XG9 351 aaPredicted RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 MRPL50Q8N5N7 158 aaKnown RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 TEX13AQ9BXU3 409 aaPredicted RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 PDIA4P13667 645 aaKnown RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 STX8Q9UNK0 236 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 BAG4O95429 457 aaKnown RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
MBD3-201ENST00000156825 TMX3Q96JJ7 454 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 MAP7D2Q96T17 732 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 MFSD6Q6ZSS7 791 aa21.87■■□□□ 1.09
MBD3-201ENST00000156825 TRAPPC8Q9Y2L5 1435 aa21.86■■□□□ 1.09
MBD3-201ENST00000156825 GRM8O00222 908 aa21.86■■□□□ 1.09
MBD3-201ENST00000156825 ASXL2Q76L83 1435 aa21.86■■□□□ 1.09
MBD3-201ENST00000156825 IDEP14735 1019 aa21.86■■□□□ 1.09
MBD3-201ENST00000156825 DHX37Q8IY37 1157 aaKnown RBP21.86■■□□□ 1.09
MBD3-201ENST00000156825 TESK2Q96S53 571 aa21.86■■□□□ 1.09
MBD3-201ENST00000156825 HELBQ8NG08 1087 aaPredicted RBP21.86■■□□□ 1.09
MBD3-201ENST00000156825 F8W031 263 aaPredicted RBP21.85■■□□□ 1.09
MBD3-201ENST00000156825 METAP2P50579 478 aaKnown RBP eCLIP21.85■■□□□ 1.092e-6■■■□□ 16.5
MBD3-201ENST00000156825 TAX1BP1Q86VP1 789 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 ATP6V1AP38606 617 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 TAF3Q5VWG9 929 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 HDAC1Q13547 482 aaPredicted RBP21.85■■□□□ 1.09
MBD3-201ENST00000156825 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 ANKRD44Q8N8A2 993 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 PLCH2O75038 1416 aa21.85■■□□□ 1.09
MBD3-201ENST00000156825 KLF18A0A0U1RQI7 1052 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 LIG1P18858 919 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 TOP1P11387 765 aaKnown RBP21.84■■□□□ 1.09
MBD3-201ENST00000156825 ERLIN2O94905 339 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 ATP2B3Q16720 1220 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 NCOA7Q8NI08 942 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 ARHGAP45Q92619 1136 aa21.84■■□□□ 1.09
MBD3-201ENST00000156825 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
MBD3-201ENST00000156825 RBM8AQ9Y5S9 174 aaKnown RBP21.83■■□□□ 1.09
MBD3-201ENST00000156825 UHRF1BP1LA0JNW5 1464 aa21.83■■□□□ 1.08
MBD3-201ENST00000156825 ANKRD62A6NC57 917 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms