RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 USP42Q9H9J4 1324 aaKnown RBP31.84■■■□□ 2.69
RTN4R-201ENST00000043402 ZCRB1Q8TBF4 217 aaKnown RBP31.84■■■□□ 2.69
RTN4R-201ENST00000043402 ABCA3Q99758 1704 aa31.83■■■□□ 2.69
RTN4R-201ENST00000043402 ANKRD13DQ6ZTN6 518 aa31.83■■■□□ 2.69
RTN4R-201ENST00000043402 MYD88Q99836 296 aa31.83■■■□□ 2.69
RTN4R-201ENST00000043402 ANO2Q9NQ90 1003 aa31.83■■■□□ 2.69
RTN4R-201ENST00000043402 NEXNQ0ZGT2 675 aa31.82■■■□□ 2.68
RTN4R-201ENST00000043402 GCKRQ14397 625 aa31.82■■■□□ 2.68
RTN4R-201ENST00000043402 PCDH11XQ9BZA7 1347 aa31.81■■■□□ 2.68
RTN4R-201ENST00000043402 PCDH11YQ9BZA8 1340 aa31.81■■■□□ 2.68
RTN4R-201ENST00000043402 ST18O60284 1047 aa31.81■■■□□ 2.68
RTN4R-201ENST00000043402 PALD1Q9ULE6 856 aa31.81■■■□□ 2.68
RTN4R-201ENST00000043402 CLASRPQ8N2M8 674 aaKnown RBP31.81■■■□□ 2.68
RTN4R-201ENST00000043402 TTC41PQ6P2S7 1318 aa31.79■■■□□ 2.68
RTN4R-201ENST00000043402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.79■■■□□ 2.68
RTN4R-201ENST00000043402 ERC1Q8IUD2 1116 aa31.78■■■□□ 2.68
RTN4R-201ENST00000043402 SASH1O94885 1247 aa31.77■■■□□ 2.68
RTN4R-201ENST00000043402 EPHA10Q5JZY3 1008 aa31.77■■■□□ 2.68
RTN4R-201ENST00000043402 CARD10Q9BWT7 1032 aa31.77■■■□□ 2.68
RTN4R-201ENST00000043402 CNTROBQ8N137 903 aa31.77■■■□□ 2.68
RTN4R-201ENST00000043402 LAMB4A4D0S4 1761 aa31.76■■■□□ 2.68
RTN4R-201ENST00000043402 GLRX3O76003 335 aaKnown RBP31.75■■■□□ 2.67
RTN4R-201ENST00000043402 IL2RBP14784 551 aa31.75■■■□□ 2.67
RTN4R-201ENST00000043402 STRN4Q9NRL3 753 aa31.75■■■□□ 2.67
RTN4R-201ENST00000043402 MCCP23508 829 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 NEK4P51957 841 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 NKX1-1Q15270 411 aaPredicted RBP31.74■■■□□ 2.67
RTN4R-201ENST00000043402 SHANK3Q9BYB0 1731 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 DDX11L8A8MPP1 907 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 ERVV-2B6SEH9 535 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 TRAK2O60296 914 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 SSFA2P28290 1259 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 ANAPC15P60006 121 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 ECHDC1Q9NTX5 307 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 ARFGEF2Q9Y6D5 1785 aa31.74■■■□□ 2.67
RTN4R-201ENST00000043402 NBPF26B4DH59 902 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 SGSM2O43147 1006 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 NBPF14Q5TI25 921 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 NBPF10Q6P3W6 841 aaKnown RBP31.73■■■□□ 2.67
RTN4R-201ENST00000043402 NBPF15Q8N660 670 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 KLHDC4Q8TBB5 520 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 JARID2Q92833 1246 aaPredicted RBP31.73■■■□□ 2.67
RTN4R-201ENST00000043402 IL17RAQ96F46 866 aa31.73■■■□□ 2.67
RTN4R-201ENST00000043402 IFIT2P09913 472 aaKnown RBP31.72■■■□□ 2.67
RTN4R-201ENST00000043402 G3BP1Q13283 466 aaKnown RBP eCLIP31.72■■■□□ 2.67
RTN4R-201ENST00000043402 AACSQ86V21 672 aa31.72■■■□□ 2.67
RTN4R-201ENST00000043402 NHSL1Q5SYE7 1610 aa31.72■■■□□ 2.67
RTN4R-201ENST00000043402 UBR2Q8IWV8 1755 aa31.72■■■□□ 2.67
RTN4R-201ENST00000043402 AFDNP55196 1824 aaKnown RBP31.71■■■□□ 2.67
RTN4R-201ENST00000043402 DDX54Q8TDD1 881 aaKnown RBP31.71■■■□□ 2.67
RTN4R-201ENST00000043402 EPB41L2O43491 1005 aaKnown RBP31.71■■■□□ 2.67
RTN4R-201ENST00000043402 EAF2Q96CJ1 260 aaPredicted RBP31.71■■■□□ 2.67
RTN4R-201ENST00000043402 SIL1Q9H173 461 aa31.71■■■□□ 2.67
RTN4R-201ENST00000043402 GBP4Q96PP9 640 aa31.7■■■□□ 2.67
RTN4R-201ENST00000043402 ATP5J2-PTCD1G3V325 749 aa31.7■■■□□ 2.66
RTN4R-201ENST00000043402 PTCD1O75127 700 aaKnown RBP31.7■■■□□ 2.66
RTN4R-201ENST00000043402 ZGPATQ8N5A5 531 aaKnown RBP31.7■■■□□ 2.66
RTN4R-201ENST00000043402 KCPQ6ZWJ8 1503 aa31.69■■■□□ 2.66
RTN4R-201ENST00000043402 PLBD2Q8NHP8 589 aa31.69■■■□□ 2.66
RTN4R-201ENST00000043402 HSPA4P34932 840 aa31.68■■■□□ 2.66
RTN4R-201ENST00000043402 EVA1CP58658 441 aa31.68■■■□□ 2.66
RTN4R-201ENST00000043402 PAPPAQ13219 1627 aa31.67■■■□□ 2.66
RTN4R-201ENST00000043402 CWC27Q6UX04 472 aaKnown RBP31.67■■■□□ 2.66
RTN4R-201ENST00000043402 UBE3BQ7Z3V4 1068 aa31.67■■■□□ 2.66
RTN4R-201ENST00000043402 GPATCH3Q96I76 525 aa31.67■■■□□ 2.66
RTN4R-201ENST00000043402 ERBB4Q15303 1308 aa31.66■■■□□ 2.66
RTN4R-201ENST00000043402 RAD50Q92878 1312 aa31.66■■■□□ 2.66
RTN4R-201ENST00000043402 LSG1Q9H089 658 aaKnown RBP31.66■■■□□ 2.66
RTN4R-201ENST00000043402 CCDC8Q9H0W5 538 aaPredicted RBP31.66■■■□□ 2.66
RTN4R-201ENST00000043402 CLEC17AQ6ZS10 378 aa31.66■■■□□ 2.66
RTN4R-201ENST00000043402 GZF1Q9H116 711 aaPredicted RBP31.66■■■□□ 2.66
RTN4R-201ENST00000043402 TLR7Q9NYK1 1049 aaKnown RBP31.66■■■□□ 2.66
RTN4R-201ENST00000043402 PKP1Q13835 747 aa31.65■■■□□ 2.66
RTN4R-201ENST00000043402 TMX3Q96JJ7 454 aa31.65■■■□□ 2.66
RTN4R-201ENST00000043402 CYP2E1P05181 493 aaPredicted RBP31.64■■■□□ 2.66
RTN4R-201ENST00000043402 RFX5P48382 616 aaPredicted RBP31.64■■■□□ 2.66
RTN4R-201ENST00000043402 CWC22Q9HCG8 908 aaKnown RBP31.64■■■□□ 2.66
RTN4R-201ENST00000043402 A0A087WZG4 1122 aa31.64■■■□□ 2.66
RTN4R-201ENST00000043402 CASP7P55210 303 aa31.64■■■□□ 2.66
RTN4R-201ENST00000043402 A1BGP04217 495 aa31.63■■■□□ 2.65
RTN4R-201ENST00000043402 RABL6Q3YEC7 729 aaPredicted RBP31.63■■■□□ 2.65
RTN4R-201ENST00000043402 TTLL7Q6ZT98 887 aa31.63■■■□□ 2.65
RTN4R-201ENST00000043402 COL15A1P39059 1388 aa31.63■■■□□ 2.65
RTN4R-201ENST00000043402 UPF3BQ9BZI7 483 aaKnown RBP31.63■■■□□ 2.65
RTN4R-201ENST00000043402 COPRSQ9NQ92 184 aa31.63■■■□□ 2.65
RTN4R-201ENST00000043402 MCM2P49736 904 aa31.61■■■□□ 2.65
RTN4R-201ENST00000043402 NUCB2P80303 420 aa31.61■■■□□ 2.65
RTN4R-201ENST00000043402 PTPN12Q05209 780 aaKnown RBP31.61■■■□□ 2.65
RTN4R-201ENST00000043402 TNS2Q63HR2 1409 aa31.61■■■□□ 2.65
RTN4R-201ENST00000043402 TOGARAM1Q9Y4F4 1720 aa31.6■■■□□ 2.65
RTN4R-201ENST00000043402 EVI5LQ96CN4 794 aa31.6■■■□□ 2.65
RTN4R-201ENST00000043402 DIAPH3Q9NSV4 1193 aa31.6■■■□□ 2.65
RTN4R-201ENST00000043402 BAG4O95429 457 aaKnown RBP31.59■■■□□ 2.65
RTN4R-201ENST00000043402 BRPF3Q9ULD4 1205 aa31.58■■■□□ 2.65
RTN4R-201ENST00000043402 NUP188Q5SRE5 1749 aa31.58■■■□□ 2.65
RTN4R-201ENST00000043402 IL27Q8NEV9 243 aa31.58■■■□□ 2.65
RTN4R-201ENST00000043402 SNX14Q9Y5W7 946 aa31.58■■■□□ 2.65
RTN4R-201ENST00000043402 CUL4AQ13619 759 aa31.57■■■□□ 2.64
RTN4R-201ENST00000043402 RASEFQ8IZ41 740 aa31.57■■■□□ 2.64
RTN4R-201ENST00000043402 KIAA1211Q6ZU35 1233 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms