RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 SDSP20132 328 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 MX1P20591 662 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 PIGBQ92521 554 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
RTFDC1-201ENST00000023939 BCL9O00512 1426 aa17.64■□□□□ 0.42
RTFDC1-201ENST00000023939 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
RTFDC1-201ENST00000023939 MYD88Q99836 296 aa17.64■□□□□ 0.41
RTFDC1-201ENST00000023939 SLIT2O94813 1529 aa17.64■□□□□ 0.41
RTFDC1-201ENST00000023939 ITGB4P16144 1822 aa17.63■□□□□ 0.41
RTFDC1-201ENST00000023939 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
RTFDC1-201ENST00000023939 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
RTFDC1-201ENST00000023939 ATG3Q9NT62 314 aa17.63■□□□□ 0.41
RTFDC1-201ENST00000023939 ADAMTS2O95450 1211 aa17.62■□□□□ 0.41
RTFDC1-201ENST00000023939 CASC1Q6TDU7 716 aa17.62■□□□□ 0.41
RTFDC1-201ENST00000023939 TUBGCP6Q96RT7 1819 aa17.62■□□□□ 0.41
RTFDC1-201ENST00000023939 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
RTFDC1-201ENST00000023939 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
RTFDC1-201ENST00000023939 A1BGP04217 495 aa17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 BICC1Q9H694 974 aaKnown RBP17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
RTFDC1-201ENST00000023939 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
RTFDC1-201ENST00000023939 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
RTFDC1-201ENST00000023939 CASP7P55210 303 aa17.59■□□□□ 0.41
RTFDC1-201ENST00000023939 RABL6Q3YEC7 729 aaPredicted RBP17.59■□□□□ 0.41
RTFDC1-201ENST00000023939 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.41
RTFDC1-201ENST00000023939 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
RTFDC1-201ENST00000023939 H7C1W4 665 aa17.58■□□□□ 0.4
RTFDC1-201ENST00000023939 STARD3NLO95772 234 aa17.58■□□□□ 0.4
RTFDC1-201ENST00000023939 TTLL7Q6ZT98 887 aa17.58■□□□□ 0.4
RTFDC1-201ENST00000023939 TBC1D2Q9BYX2 928 aa17.58■□□□□ 0.4
RTFDC1-201ENST00000023939 UBAP1LF5GYI3 381 aa17.57■□□□□ 0.4
RTFDC1-201ENST00000023939 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
RTFDC1-201ENST00000023939 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
RTFDC1-201ENST00000023939 JCADQ9P266 1359 aa17.57■□□□□ 0.4
RTFDC1-201ENST00000023939 DDB1Q16531 1140 aa17.56■□□□□ 0.4
RTFDC1-201ENST00000023939 CLASRPQ8N2M8 674 aaKnown RBP17.56■□□□□ 0.4
RTFDC1-201ENST00000023939 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
RTFDC1-201ENST00000023939 SNX21Q969T3 373 aa17.56■□□□□ 0.4
RTFDC1-201ENST00000023939 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
RTFDC1-201ENST00000023939 A0A087WZG4 1122 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 EPHA10Q5JZY3 1008 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 KIF2CQ99661 725 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 USP26Q9BXU7 913 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 REC8O95072 547 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
RTFDC1-201ENST00000023939 DOT1LQ8TEK3 1739 aa17.54■□□□□ 0.4
RTFDC1-201ENST00000023939 ERC2O15083 957 aa17.54■□□□□ 0.4
RTFDC1-201ENST00000023939 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
RTFDC1-201ENST00000023939 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.45e-10■■□□□ 13.8
RTFDC1-201ENST00000023939 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
RTFDC1-201ENST00000023939 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
RTFDC1-201ENST00000023939 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 TSHZ3Q63HK5 1081 aa17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 TJP1Q07157 1748 aa17.53■□□□□ 0.4
RTFDC1-201ENST00000023939 SASH1O94885 1247 aa17.52■□□□□ 0.4
RTFDC1-201ENST00000023939 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
RTFDC1-201ENST00000023939 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
RTFDC1-201ENST00000023939 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.39
RTFDC1-201ENST00000023939 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.39
RTFDC1-201ENST00000023939 CHMLP26374 656 aa17.52■□□□□ 0.39
RTFDC1-201ENST00000023939 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.39
RTFDC1-201ENST00000023939 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.39
RTFDC1-201ENST00000023939 CICQ96RK0 1608 aaPredicted RBP17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 FOXO4P98177 505 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 VPS72Q15906 364 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 ECHDC1Q9NTX5 307 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 BCL9LQ86UU0 1499 aa17.51■□□□□ 0.39
RTFDC1-201ENST00000023939 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 MAP3K15Q6ZN16 1313 aa17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 IFIT2P09913 472 aaKnown RBP17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 PTPN12Q05209 780 aaKnown RBP17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
RTFDC1-201ENST00000023939 HSCBQ8IWL3 235 aa17.49■□□□□ 0.39
RTFDC1-201ENST00000023939 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 RABEP1Q15276 862 aa17.48■□□□□ 0.39
RTFDC1-201ENST00000023939 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms