RNA–Protein interactions for RNA: ENST00000023897.10

GABRA1-201, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 2,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-201ENST00000023897 RBM27Q9P2N5 1060 aaKnown RBP17.71■□□□□ 0.43
GABRA1-201ENST00000023897 UTYO14607 1347 aa17.71■□□□□ 0.43
GABRA1-201ENST00000023897 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
GABRA1-201ENST00000023897 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
GABRA1-201ENST00000023897 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
GABRA1-201ENST00000023897 DIAPH3Q9NSV4 1193 aa17.7■□□□□ 0.42
GABRA1-201ENST00000023897 TMEM63CQ9P1W3 806 aa17.7■□□□□ 0.42
GABRA1-201ENST00000023897 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
GABRA1-201ENST00000023897 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
GABRA1-201ENST00000023897 RBSNQ9H1K0 784 aa17.7■□□□□ 0.42
GABRA1-201ENST00000023897 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
GABRA1-201ENST00000023897 SYAP1Q96A49 352 aaPredicted RBP17.69■□□□□ 0.42
GABRA1-201ENST00000023897 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
GABRA1-201ENST00000023897 RPAP1Q9BWH6 1393 aaPredicted RBP17.69■□□□□ 0.42
GABRA1-201ENST00000023897 IFIT2P09913 472 aaKnown RBP17.68■□□□□ 0.42
GABRA1-201ENST00000023897 CWC27Q6UX04 472 aaKnown RBP17.68■□□□□ 0.42
GABRA1-201ENST00000023897 COL18A1P39060 1754 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 GRM8O00222 908 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 HS1BP3Q53T59 392 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 CHAMP1Q96JM3 812 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 LAMB4A4D0S4 1761 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 MRC1P22897 1456 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 C1orf167Q5SNV9 1468 aa17.68■□□□□ 0.42
GABRA1-201ENST00000023897 XPCQ01831 940 aaPredicted RBP17.67■□□□□ 0.42
GABRA1-201ENST00000023897 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 EVI5LQ96CN4 794 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 ERBB3P21860 1342 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 AK2P54819 239 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 CWF19L2Q2TBE0 894 aaKnown RBP17.67■□□□□ 0.42
GABRA1-201ENST00000023897 KRT28Q7Z3Y7 464 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 PDLIM2Q96JY6 352 aa17.67■□□□□ 0.42
GABRA1-201ENST00000023897 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
GABRA1-201ENST00000023897 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.67■□□□□ 0.42
GABRA1-201ENST00000023897 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 SYCE3A1L190 88 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 KCNB2Q92953 911 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 ARFGEF2Q9Y6D5 1785 aa17.66■□□□□ 0.42
GABRA1-201ENST00000023897 HIP1O00291 1037 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 NAP1L5Q96NT1 182 aaPredicted RBP17.65■□□□□ 0.42
GABRA1-201ENST00000023897 TM6SF1Q9BZW5 370 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 AXIN2Q9Y2T1 843 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 AACSQ86V21 672 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 SUCLG2Q96I99 432 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
GABRA1-201ENST00000023897 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.41
GABRA1-201ENST00000023897 PHF14O94880 888 aa17.64■□□□□ 0.41
GABRA1-201ENST00000023897 RUFY3Q7L099 469 aa17.64■□□□□ 0.41
GABRA1-201ENST00000023897 PA2G4Q9UQ80 394 aaKnown RBP17.64■□□□□ 0.41
GABRA1-201ENST00000023897 PARP4Q9UKK3 1724 aaKnown RBP17.64■□□□□ 0.41
GABRA1-201ENST00000023897 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 G3BP1Q13283 466 aaKnown RBP eCLIP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 PDIA6Q15084 440 aa17.63■□□□□ 0.41
GABRA1-201ENST00000023897 VPS53Q5VIR6 699 aa17.63■□□□□ 0.41
GABRA1-201ENST00000023897 CASTP20810 708 aaKnown RBP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 LARP1Q6PKG0 1096 aaKnown RBP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 KAZALD1Q96I82 304 aa17.63■□□□□ 0.41
GABRA1-201ENST00000023897 ZSCAN31Q96LW9 406 aaPredicted RBP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 BICC1Q9H694 974 aaKnown RBP17.63■□□□□ 0.41
GABRA1-201ENST00000023897 ZSCAN22P10073 491 aaPredicted RBP17.62■□□□□ 0.41
GABRA1-201ENST00000023897 ZNF790Q6PG37 636 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 RAPGEF4Q8WZA2 1011 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 MSNP26038 577 aaKnown RBP17.62■□□□□ 0.41
GABRA1-201ENST00000023897 PTH1RQ03431 593 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 SH2B1Q9NRF2 756 aaPredicted RBP17.62■□□□□ 0.41
GABRA1-201ENST00000023897 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 SMC3Q9UQE7 1217 aa17.62■□□□□ 0.41
GABRA1-201ENST00000023897 SASH1O94885 1247 aa17.61■□□□□ 0.41
GABRA1-201ENST00000023897 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
GABRA1-201ENST00000023897 USP48Q86UV5 1035 aa17.61■□□□□ 0.41
GABRA1-201ENST00000023897 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
GABRA1-201ENST00000023897 ATP6V1DQ9Y5K8 247 aa17.61■□□□□ 0.41
GABRA1-201ENST00000023897 STX6O43752 255 aa17.6■□□□□ 0.41
GABRA1-201ENST00000023897 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 PDRG1Q9NUG6 133 aa17.6■□□□□ 0.41
GABRA1-201ENST00000023897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 CYP46A1Q9Y6A2 500 aa17.6■□□□□ 0.41
GABRA1-201ENST00000023897 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 TATP17735 454 aaPredicted RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
GABRA1-201ENST00000023897 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
GABRA1-201ENST00000023897 MEGF6O75095 1541 aa17.6■□□□□ 0.41
GABRA1-201ENST00000023897 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
GABRA1-201ENST00000023897 EAF2Q96CJ1 260 aaPredicted RBP17.59■□□□□ 0.41
GABRA1-201ENST00000023897 NEURL1BA8MQ27 555 aa17.59■□□□□ 0.41
GABRA1-201ENST00000023897 F13A1P00488 732 aa17.59■□□□□ 0.41
GABRA1-201ENST00000023897 PHKG2P15735 406 aa17.59■□□□□ 0.41
GABRA1-201ENST00000023897 SYT1P21579 422 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms