RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Rab3gap1Q80UJ7 981 aa10.47□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Nol11Q8BJW5 723 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Ccdc38Q8CDN8 563 aa10.47□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Prc1Q99K43 603 aaKnown RBP10.47□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Vps33aQ9D2N9 598 aa10.47□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Tshz3Q8CGV9 1081 aa10.46□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Uspl1Q3ULM6 1089 aa10.46□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Tpcn1Q9EQJ0 817 aa10.46□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 RictorQ6QI06 1708 aa10.46□□□□□ -0.73
Prpf40a-208ENSMUST00000210789 Mdc1Q5PSV9 1707 aa10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Q3UJC8 639 aa10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Pip4k2bQ80XI4 416 aa10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ccdc60Q8C4J0 545 aa10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Smc1aQ9CU62 1233 aaKnown RBP10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 SarnpQ9D1J3 210 aaKnown RBP10.46□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 PzpQ61838 1495 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Nap1l2P51860 460 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ccdc102aQ3TMW1 549 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Q66JV7 365 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Naif1Q6PFD7 327 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Adamtsl3G3UXC7 1706 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tmem165P52875 323 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Zscan22Q8BGS5 496 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ddx27Q921N6 760 aaKnown RBP10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Hmx1O70218 332 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tpm3P21107 285 aaKnown RBP10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Drc7Q6V3W6 876 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 St18Q80TY4 1045 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Mical1Q8VDP3 1048 aa10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Mad1l1Q9WTX8 717 aaKnown RBP10.45□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Gm3409A0A0G2JE67 319 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tbc1d2B1AVH7 922 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Q9D2X8 372 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 4930407I10RikD3Z5T8 1512 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Spata16Q8C636 571 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Smarca5Q91ZW3 1051 aaKnown RBP10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ttc21aQ8C0S4 1314 aa10.44□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Cdk4P30285 303 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Uri1Q3TLD5 531 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tpm4Q6IRU2 248 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Irx1P81068 480 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ddx49Q4FZF3 480 aaKnown RBP10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Trak2Q6P9N8 913 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tmco3Q8BH01 678 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Kri1Q8VDQ9 704 aaKnown RBP10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tlcd1Q99JT6 247 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 H2afxP27661 143 aaKnown RBP10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Trim25Q61510 634 aaKnown RBP10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Mns1Q61884 491 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ube2oQ6ZPJ3 1288 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Kirrel3Q8BR86 778 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Def6Q8C2K1 630 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ap3b2Q9JME5 1082 aa10.43□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Evi5P97366 809 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Gm11983V9GXS8 105 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Fam135bQ9DAI6 1403 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Pola1P33609 1465 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Setd1aE9PYH6 1716 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Plekhg1F6S200 1446 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Calcoco2A2A6M5 331 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Zkscan16A2ALW2 728 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 CalrP14211 416 aaKnown RBP10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 FntaQ61239 377 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 CarsQ9ER72 831 aaKnown RBP10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 IghaA0A0A6YXW6 389 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Birc3O08863 600 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Kif13aQ9EQW7 1749 aa10.42□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Kifc2O08672 792 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Wwc1Q5SXA9 1104 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ppp6r3Q922D4 844 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Gm16486A0A1D5RMD1 1434 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Pdia3P27773 505 aaKnown RBP10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Hdgfl1Q2VPR5 283 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Npdc1Q64322 332 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Adcy2Q80TL1 1090 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Wdr24Q8CFJ9 790 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ccar2Q8VDP4 922 aaKnown RBP10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 AvenQ9D9K3 342 aa10.41□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Kif24Q6NWW5 1356 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 EvcP57680 1005 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Cfap157Q0VFX2 523 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Usp48Q3V0C5 1052 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Ccdc57Q6PHN1 1016 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Zeb2Q9R0G7 1215 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Gm10563F6WIE4 79 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Tyro3P55144 880 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Snw1Q9CSN1 536 aaKnown RBP10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Mis12Q9CY25 206 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Cdk5rap2Q8K389 1822 aa10.4□□□□□ -0.74
Prpf40a-208ENSMUST00000210789 Q8CEZ4 452 aa10.4□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Ccdc83Q9D4V3 305 aa10.4□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Add3Q9QYB5 706 aaKnown RBP10.4□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Tmem94Q7TSH8 1360 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Cd22P35329 862 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Scnn1bQ9WU38 638 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Itsn1Q9Z0R4 1714 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Mctp1E9PV86 951 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Surf1P09925 306 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Cplx2P84086 134 aa10.39□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Mum1Q6DID5 682 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms