RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ncoa4Q5U4H9 625 aa15.47■□□□□ 0.07
Nup88-203ENSMUST00000108531 Map3k2Q61083 619 aa15.47■□□□□ 0.07
Nup88-203ENSMUST00000108531 Ddx11Q6AXC6 880 aa15.47■□□□□ 0.07
Nup88-203ENSMUST00000108531 Naa30Q8CES0 364 aa15.47■□□□□ 0.07
Nup88-203ENSMUST00000108531 Pa2g4P50580 394 aaKnown RBP15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Pcmtd1P59913 357 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Bach2P97303 839 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 NcapgE9PWG6 1004 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Sgsm2Q80U12 1005 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Tmem119Q8R138 280 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Zbtb3Q91X45 518 aa15.46■□□□□ 0.07
Nup88-203ENSMUST00000108531 Kcnb2A6H8H5 907 aa15.45■□□□□ 0.06
Nup88-203ENSMUST00000108531 Gimap6Q8K349 305 aa15.45■□□□□ 0.06
Nup88-203ENSMUST00000108531 Nkx2-3P97334 362 aa15.45■□□□□ 0.06
Nup88-203ENSMUST00000108531 Hvcn1Q3U2S8 269 aa15.45■□□□□ 0.06
Nup88-203ENSMUST00000108531 Adcy5P84309 1262 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 EappQ5BU09 281 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 HellsQ60848 821 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Cdca7lQ922M5 438 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Rbm8a2A0A0N4SUH6 174 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Nup88Q8CEC0 753 aaKnown RBP15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 SnrkQ8VDU5 748 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Kcnh5Q920E3 988 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Rbm8aQ9CWZ3 174 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Igbp1bQ9QZ29 343 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Sytl4Q9R0Q1 673 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Tmem2Q5FWI3 1383 aa15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 Kiaa0232Q80U59 1396 aaKnown RBP15.44■□□□□ 0.06
Nup88-203ENSMUST00000108531 EzrP26040 586 aaKnown RBP15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 F2rP30558 430 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Bcl2l13P59017 434 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Dmrt2Q8BG36 561 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Ppp1r37Q8BKR5 712 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Wdr24Q8CFJ9 790 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 GckrQ91X44 587 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 NaspQ99MD9 773 aaKnown RBP15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Bicc1Q99MQ1 977 aaKnown RBP15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Ak2Q9WTP6 239 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Usp48Q3V0C5 1052 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Irf9Q61179 399 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Taok2Q6ZQ29 1240 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 PdcQ9QW08 244 aa15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Mad1l1Q9WTX8 717 aaKnown RBP15.43■□□□□ 0.06
Nup88-203ENSMUST00000108531 Cd22P35329 862 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Plppr3Q7TPB0 716 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Cfap73J3QPZ5 306 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Pkp1P97350 728 aaKnown RBP15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Ubxn10Q8BG34 277 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Sf3a1Q8K4Z5 791 aaKnown RBP15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Dnajc10Q9DC23 793 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Gli3Q61602 1583 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Sipa1l2Q80TE4 1722 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Rimbp3Q3V0F0 1606 aa15.42■□□□□ 0.06
Nup88-203ENSMUST00000108531 Spata31d1bE9QA57 1361 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Fmnl2A2APV2 1086 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Eef2kO08796 724 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Mcm3P25206 812 aaKnown RBP15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Grm8P47743 908 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Utp3Q9JI13 469 aaKnown RBP15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 TimelessQ9R1X4 1197 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Wdr78E9PYY5 807 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Mx2Q9WVP9 655 aa15.41■□□□□ 0.06
Nup88-203ENSMUST00000108531 Zbtb45Q52KG4 520 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Mrpl50Q8VDT9 159 aaKnown RBP15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Aox1O54754 1333 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Klhl34A2AI76 644 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Babam1Q3UI43 333 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Ccdc66Q6NS45 935 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Nap1l3Q794H2 544 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Edc3Q8K2D3 508 aaKnown RBP15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Il1rapl2Q9ERS6 686 aa15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Psma5Q9Z2U1 241 aaKnown RBP15.4■□□□□ 0.06
Nup88-203ENSMUST00000108531 Col14a1Q80X19 1797 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Kif3aP28741 701 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ccdc162pQ0VG85 912 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 SympkQ80X82 1284 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Rps6ka5Q8C050 863 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Atf7Q8R0S1 413 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Bag3Q9JLV1 577 aaKnown RBP15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Leo1Q5XJE5 667 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Slc26a8Q8R0C3 999 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Taf7Q9R1C0 341 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Zbtb22Q9Z0G7 638 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Siglec1Q62230 1695 aa15.39■□□□□ 0.05
Nup88-203ENSMUST00000108531 Evi5lH3BKQ3 813 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ncbp1Q3UYV9 790 aaKnown RBP15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Zfp113Q8C689 439 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Atp8b3Q6UQ17 1335 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Irf5P56477 497 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Usp25P57080 1055 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Esyt1Q3U7R1 1092 aaKnown RBP15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Rnf20Q5DTM8 973 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Polr3dQ91WD1 398 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Mmel1Q9JLI3 765 aa15.38■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ugt1a5B2RT14 529 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ets1P27577 440 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Ppp6r1Q7TSI3 856 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Tsr2Q8C8T8 191 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Rhot2Q8JZN7 620 aa15.37■□□□□ 0.05
Nup88-203ENSMUST00000108531 Bloc1s2Q9CWG9 143 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms