RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Disp3A3KFU9 1347 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Kif13aQ9EQW7 1749 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cyp2d12Q8BVD2 504 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Kdm4aQ8BW72 1064 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Krt85Q9Z2T6 507 aa11.54□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Echdc1Q9D9V3 322 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Bag3Q9JLV1 577 aaKnown RBP11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Znf326O88291 580 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cct2P80314 535 aaKnown RBP11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Lmbr1lQ9D1E5 489 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cul9Q80TT8 1865 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ifit2Q64112 472 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cep57l1Q8VDS7 400 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 BccipQ9CWI3 316 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Speer4bQ9D9F7 267 aa11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 PhaxQ9JJT9 385 aaKnown RBP11.53□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 ScaperF8VQ70 1398 aaKnown RBP11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Mdm2P23804 489 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ets1P27577 440 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 GckrQ91X44 587 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Cdca7lQ922M5 438 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Ndufa8Q9DCJ5 172 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 TefQ9JLC6 301 aa11.52□□□□□ -0.56
Pcdh1-201ENSMUST00000057185 Unc5clQ6R653 518 aa11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Pdcl2Q78Y63 240 aa11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Zbtb3Q91X45 518 aa11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ddx46Q569Z5 1032 aaKnown RBP11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 ZwintQ9CQU5 252 aa11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rrs1Q9CYH6 365 aaKnown RBP11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 NktrP30415 1453 aa11.52□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Zkscan7E9PVW1 718 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Usp25P57080 1055 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Mindy4Q3UQI9 744 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Irf9Q61179 399 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Fsd1Q7TPM6 496 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ppp6r1Q7TSI3 856 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Slc39a6Q8C145 765 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Farp2Q91VS8 1065 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Hmgn5Q9JL35 406 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm21663A0A0G2JE01 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm7361D3Z6R1 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 5031410I06RikE9Q4E0 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm1979E9QAN3 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm5862K7N5V5 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm10220K7N660 267 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Eif4a1P60843 406 aaKnown RBP11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Zpr1Q62384 459 aa11.51□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Dip2bQ3UH60 1574 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Wdr78E9PYY5 807 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gpatch3Q8BIY1 525 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ccar2Q8VDP4 922 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gigyf1Q99MR1 1044 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Dip2aQ8BWT5 1523 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Bicc1Q99MQ1 977 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rufy3Q9D394 469 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Chd4Q6PDQ2 1915 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rad50P70388 1312 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Tgfb1i1Q62219 461 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Nop14Q8R3N1 860 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Rapgef3Q8VCC8 918 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 LratQ9JI60 231 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ak2Q9WTP6 239 aa11.5□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Erbb4Q61527 1308 aa11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Atf5O70191 283 aa11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Acsbg1Q99PU5 721 aa11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Parp14Q2EMV9 1817 aa11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Gm21680A0A0G2JGR8 267 aa11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Esyt1Q3U7R1 1092 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Eif3aP23116 1344 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Wdr33Q8K4P0 1330 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cdk12Q14AX6 1484 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Noc3lQ8VI84 807 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cdkn1cP49919 348 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 HdgfP51859 237 aaKnown RBP11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Soga3Q6NZL0 945 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 4930504O13RikQ8C5Z9 145 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Pms1Q8K119 917 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Stk36Q69ZM6 1316 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Spty2d1Q68FG3 682 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Atf7Q8R0S1 413 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Elmsan1E9Q2I4 1089 aaKnown RBP11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Zbtb21E9Q444 1094 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Grm8P47743 908 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Cplx1P63040 134 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Prkab2Q6PAM0 271 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ttc19Q8CC21 365 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Slain2Q8CI08 581 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ubxn4Q8VCH8 506 aa11.48□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Bach2P97303 839 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Taf3Q5HZG4 932 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ano6Q6P9J9 911 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Igbp1bQ9QZ29 343 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Hand2Q61039 217 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Golim4Q8BXA1 655 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Smc4Q8CG47 1286 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 OptnQ8K3K8 584 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Bloc1s2Q9CWG9 143 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ripk4Q9ERK0 786 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 Ift172Q6VH22 1749 aa11.47□□□□□ -0.57
Pcdh1-201ENSMUST00000057185 CemipQ8BI06 1361 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 69.1 ms