RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Eif3j1Q3UGC7 261 aaKnown RBP11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Eif3j2Q66JS6 263 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Larp1Q6ZQ58 1072 aaKnown RBP11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Tango6Q8C3S2 1079 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ppp1r42Q8R1Z4 357 aa11.42□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Kcnj4P52189 445 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Top1mtQ8R4U6 593 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Abl1P00520 1123 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Q3UPC7 1272 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gnat3Q3V3I2 354 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Dmrt2Q8BG36 561 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Map3k19E9Q3S4 1311 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Rreb1Q3UH06 1700 aaKnown RBP11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ddx23D3Z0M9 819 aaKnown RBP11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Paxbp1P58501 919 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 PdiltQ9DAN1 588 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 PtprtQ99M80 1454 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Rbm28Q8CGC6 750 aaKnown RBP11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Iqgap1Q9JKF1 1657 aaKnown RBP11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ankrd44B2RXR6 993 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Tex14Q7M6U3 1450 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Adgrb3Q80ZF8 1522 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Olfml1Q8BSH2 233 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 4921504E06RikQ8CET2 560 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Kdm6aO70546 1401 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Hecw2Q6I6G8 1578 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Akap12Q9WTQ5 1684 aa11.41□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Mnat1P51949 309 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Lrrfip1Q3UZ39 729 aaKnown RBP11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Adck5Q80V03 582 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Jakmip1Q8BVL9 626 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Sptbn5F6UCX4 1208 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Pdia4P08003 638 aaKnown RBP11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 GpkowQ56A08 488 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Acsbg1Q99PU5 721 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Smc1aQ9CU62 1233 aaKnown RBP11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Gigyf2Q6Y7W8 1291 aaKnown RBP11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Slu7Q8BHJ9 585 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Cep57l1Q8VDS7 400 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Ripk4Q9ERK0 786 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Taf7Q9R1C0 341 aa11.4□□□□□ -0.58
Cspg4-201ENSMUST00000035661 Eif4a2P10630 407 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Tspyl3Q3UYP3 334 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Lamb3Q61087 1168 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Znf287Q9EQB9 759 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Abca17E9PX95 1733 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Abca6Q8K441 1624 aa11.4□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Tarbp1E9Q368 1579 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Tulp4Q9JIL5 1547 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Wdr63B2RY71 923 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Exoc8Q6PGF7 716 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Skor1Q8BX46 964 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Cwc25Q9DBF7 416 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Noc2lQ9WV70 747 aaKnown RBP11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Krt85Q9Z2T6 507 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ginm1Q91WR6 327 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ttc5Q99LG4 440 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 4933428M09RikQ9D3X3 192 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Jakmip3Q5DTN8 844 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Shtn1Q8K2Q9 631 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Stk38Q91VJ4 465 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Morc2aQ69ZX6 1030 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ppip5k2Q6ZQB6 1129 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 TbcaP48428 108 aaKnown RBP11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Cetn2Q9R1K9 172 aa11.39□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Slc7a3P70423 618 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Wasf1Q8R5H6 559 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Erich4Q3UNU4 136 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Slc26a8Q8R0C3 999 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Chpf2Q3UU43 768 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Phlpp2Q8BXA7 1320 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Dnajc2P54103 621 aaKnown RBP11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Maats1Q8BRC6 783 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Frat2Q8K025 231 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 CltcQ68FD5 1675 aaKnown RBP11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Bbof1Q3V079 533 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Map3k2Q61083 619 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Bicdl1A0JNT9 577 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ccdc39Q9D5Y1 937 aa11.38□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Tspyl2Q7TQI8 677 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Rufy2Q8R4C2 606 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Kidins220E9Q9B7 1793 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ankrd50F7BE84 1390 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Gtf2f1Q3THK3 508 aaKnown RBP11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Homer1Q9Z2Y3 366 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Kcna6Q61923 529 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 AidaQ8C4Q6 305 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Brf1Q8CFK2 676 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 AdnpQ9Z103 1108 aaKnown RBP11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Zcchc11B2RX14 1644 aaKnown RBP11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Spg7Q3ULF4 781 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Gbp1Q01514 589 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Aldh1l2Q8K009 923 aa11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Bag3Q9JLV1 577 aaKnown RBP11.37□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Cbx1P83917 185 aaKnown RBP11.36□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Lmbr1Q9JIT0 490 aa11.36□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Myo3aQ8K3H5 1613 aa11.36□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Tex35Q14BK3 207 aa11.36□□□□□ -0.59
Cspg4-201ENSMUST00000035661 AdgbG3UZ78 1657 aa11.36□□□□□ -0.59
Cspg4-201ENSMUST00000035661 Ppp6r1Q7TSI3 856 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms