RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Efcab2Q9CQ46 164 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Prr29B1ARI9 187 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Aplp1Q03157 653 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Map9Q3TRR0 646 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 MicalclQ9D5U9 680 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Kdm2bQ6P1G2 1309 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Catsper2A2ARP9 588 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Dctn1O08788 1281 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Wdhd1P59328 1117 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ripply1Q2WG77 201 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ift57Q8BXG3 429 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ccdc178Q8CDV0 866 aa11.63□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Brd1E9PZ26 1189 aaKnown RBP11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Pm20d1Q8C165 503 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 CenppQ9CZ92 286 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Kdm6aO70546 1401 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 GckrQ91X44 587 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Irgm2A0A140LIF8 407 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Soga3Q6NZL0 945 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Aldh8a1Q8BH00 487 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ppp1r42Q8R1Z4 357 aa11.62□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Med14A2ABV5 1459 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 HmmrQ00547 794 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Kiaa0753Q6A000 959 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Cfap45Q9D9U9 551 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ankrd50F7BE84 1390 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 KdrP35918 1367 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Myd88P22366 296 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Paxbp1P58501 919 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Arglu1Q3UL36 271 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Map3k2Q61083 619 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Slf2Q6P9P0 1278 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Tex2Q6ZPJ0 1128 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Rbm28Q8CGC6 750 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Mybbp1aQ7TPV4 1344 aaKnown RBP11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Iqgap3F8VQ29 1632 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Adcy5P84309 1262 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Gps2Q921N8 327 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Adgrl1Q80TR1 1466 aa11.61□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Vamp4O70480 141 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Abcf1Q6P542 837 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Fsd1Q7TPM6 496 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ccp110Q7TSH4 1004 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 ImmtQ8CAQ8 757 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Rufy2Q8R4C2 606 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 TxlnbQ8VBT1 685 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Stx6Q9JKK1 255 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ercc6l2Q9JIM3 1537 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Nol8Q3UHX0 1147 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 GpkowQ56A08 488 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Arhgef1Q61210 920 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ankrd1Q9CR42 319 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Nckap5lQ6GQX2 1323 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ddx17Q501J6 650 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Sass6Q80UK7 654 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ercc6lQ8BHK9 1240 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Pof1bQ8K4L4 587 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Lrrc59Q922Q8 307 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Luc7lQ9CYI4 371 aaKnown RBP11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Ccdc83Q9D4V3 305 aa11.6□□□□□ -0.55
Ldlr-201ENSMUST00000034713 EvcP57680 1005 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Nsfl1cQ9CZ44 370 aaKnown RBP11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Tecpr2Q3UH45 1423 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Odf2A3KGV1 830 aaKnown RBP11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Prim1P20664 417 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Brf1Q8CFK2 676 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Prex1Q69ZK0 1650 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Gnat3Q3V3I2 354 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Cpa2Q504N0 417 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Prpf4bQ61136 1007 aaKnown RBP11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Nip7Q9CXK8 180 aaKnown RBP11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Cfap157Q0VFX2 523 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Gas2l2Q5SSG4 860 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 LarsQ8BMJ2 1178 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Wasf1Q8R5H6 559 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Tubb4aQ9D6F9 444 aa11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 CltcQ68FD5 1675 aaKnown RBP11.59□□□□□ -0.55
Ldlr-201ENSMUST00000034713 Trim55G3X8Y1 545 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Fam83gQ5SWY7 812 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Lmbr1Q9JIT0 490 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Trap1aP19473 224 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Stim1P70302 685 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Rbm27Q5SFM8 1060 aaKnown RBP11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Ankrd13dQ6PD24 605 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Tango6Q8C3S2 1079 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Smarca5Q91ZW3 1051 aaKnown RBP11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 ZwintQ9CQU5 252 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Cwc25Q9DBF7 416 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Agtpbp1Q641K1 1218 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Bms1Q6PGF5 1284 aaKnown RBP11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Phkg2Q9DB30 406 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Kdm5aQ3UXZ9 1690 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Cbx1P83917 185 aaKnown RBP11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Smarcc1P97496 1104 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Znf692Q3U381 531 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Trim27Q62158 513 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 March6Q6ZQ89 909 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Sytl4Q9R0Q1 673 aa11.58□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Akap12Q9WTQ5 1684 aa11.57□□□□□ -0.56
Ldlr-201ENSMUST00000034713 Gtf2f1Q3THK3 508 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms