RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 MN1Q10571 1320 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 IGKV1D-17A0A075B6S4 117 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 ANKRD61A6NGH8 418 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 TRMUO75648 421 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 STK17BO94768 372 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 DDHD2O94830 711 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NKX2-2O95096 273 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NDUFA7O95182 113 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 QDPRP09417 244 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 CSH1P0DML2 217 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 CSH2P0DML3 217 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 IGLL1P15814 213 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PORP16435 677 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NMT1P30419 496 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 CRISP3P54108 245 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 RBPJQ06330 500 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PSG7Q13046 419 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PRKG2Q13237 762 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PPP2R5BQ15173 497 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 RFX4Q33E94 735 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 LRIT3Q3SXY7 679 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 MCMDC2Q4G0Z9 681 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 VAX1Q5SQQ9 334 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 C10orf62Q5T681 223 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 KPRPQ5T749 579 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 TMPRSS11FQ6ZWK6 438 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 ZER1Q7Z7L7 766 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 SERPINA9Q86WD7 417 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 MMD2Q8IY49 270 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 KLHDC8AQ8IYD2 350 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 APCDD1Q8J025 514 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 SLC37A3Q8NCC5 494 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 UBALD1Q8TB05 177 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 HDAC2Q92769 488 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PROX1Q92786 737 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NUDCD1Q96RS6 583 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 PCDHB18PQ96TA0 734 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NRTNQ99748 197 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 ATG101Q9BSB4 218 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 FAM207AQ9NSI2 230 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 ABCB8Q9NUT2 735 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 NEU3Q9UQ49 428 aa-0.16□□□□□ -2.44
CCDC7-215ENST00000639629 DSPP15924 2871 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CEP250Q9BV73 2442 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CFAP46Q8IYW2 2715 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PLXNB3Q9ULL4 1909 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 SLX4Q8IY92 1834 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 SF3B1O75533 1304 aaKnown RBP eCLIP-0.17□□□□□ -2.444e-12■■■■■ 275.7
CCDC7-215ENST00000639629 TRIP11Q15643 1979 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 FRG2CA6NGY1 282 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 A8MU76 341 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PDHXO00330 501 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 NBR2O15453 112 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CLN5O75503 358 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 TIMP1P01033 207 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 RPL35AP18077 110 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 GNAZP19086 355 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 OMGP23515 440 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 MMP12P39900 470 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 TSFMP43897 325 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 TRAPPC10P48553 1259 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 KLK7P49862 253 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CCR9P51686 369 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PSMC6P62333 389 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 NONOQ15233 471 aaKnown RBP eCLIP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 WSCD2Q2TBF2 565 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 P3H1Q32P28 736 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 ARMC4Q5T2S8 1044 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 ATP1A1-AS1Q5TC04 95 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 JAKMIP3Q5VZ66 844 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 WSCD1Q658N2 575 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 Q6ZR03 302 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 KRTAP19-3Q7Z4W3 81 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC190Q86UF4 302 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 RTL3Q8N8U3 475 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 VANGL1Q8TAA9 524 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PPP4R1Q8TF05 950 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 STAMQ92783 540 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 BCL2L2Q92843 193 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 GPR137Q96N19 417 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 IWS1Q96ST2 819 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 SEC62Q99442 399 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 KLF6Q99612 283 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 IL12RB2Q99665 862 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 FAM173AQ9BQD7 235 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CHCHD6Q9BRQ6 235 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 HCAR1Q9BXC0 346 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 NMUR1Q9HB89 426 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 GPN1Q9HCN4 374 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PDE7BQ9NP56 450 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 C6orf203Q9P0P8 240 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 ZHX1Q9UKY1 873 aaPredicted RBP-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 RPS6KL1Q9Y6S9 549 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 CADP27708 2225 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 GON4LQ3T8J9 2241 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PNPLA6Q8IY17 1366 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 PP2D1A8MPX8 630 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 SERPINE3A8MV23 424 aa-0.17□□□□□ -2.44
CCDC7-215ENST00000639629 MEI4A8MW99 385 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms