RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 MTTPP55157 894 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 KRTAP10-4P60372 401 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CACNG1Q06432 222 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 KLHL30Q0D2K2 578 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 EMC2Q15006 297 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 RASA2Q15283 850 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CD226Q15762 336 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 TBCEQ15813 527 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SYPL1Q16563 259 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 COX19Q49B96 90 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DDX59Q5T1V6 619 aaKnown RBP eCLIP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 WDR25Q64LD2 544 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 HCP5Q6MZN7 132 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 KLHL35Q6PF15 583 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 ZNF730Q6ZMV8 503 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SHISA6Q6ZSJ9 500 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 COX8CQ7Z4L0 72 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DIS3L2Q8IYB7 885 aaKnown RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SVIPQ8NHG7 77 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SMPDL3AQ92484 453 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 HTRA1Q92743 480 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 PGAM5Q96HS1 289 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CMTM3Q96MX0 182 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DPH7Q9BTV6 452 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DPEP2Q9H4A9 486 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 ZNF430Q9H8G1 570 aaPredicted RBP-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 LHX9Q9NQ69 397 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 ABCB8Q9NUT2 735 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DUSP12Q9UNI6 340 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 SMC3Q9UQE7 1217 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 NSG2Q9Y328 171 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 CDH10Q9Y6N8 788 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 DOCK9Q9BZ29 2069 aa-0.42□□□□□ -2.48
LMBR1-222ENST00000638959 FAT4Q6V0I7 4981 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 A0A0J9YXY3 114 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 TMEM110-MUSTN1A8MSY1 372 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 VGLL3A8MV65 326 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 NPHP1O15259 732 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 GOT2P00505 430 aaKnown RBP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 PENKP01210 267 aaPredicted RBP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 CALCAP01258 141 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 IGHV3-9P01782 118 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 CISD3P0C7P0 127 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 IFI30P13284 250 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 IGHV1-2P23083 117 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 UGT1A5P35504 534 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 MATR3P43243 847 aaKnown RBP eCLIP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 CDH8P55286 799 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 CCDC57Q2TAC2 916 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 NANOGP8Q6NSW7 305 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 RFPL4BQ6ZWI9 263 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 TMEM110Q86TL2 294 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 DNAAF5Q86Y56 855 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 SLC43A2Q8N370 569 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 OR1K1Q8NGR3 316 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 TAF4BQ92750 862 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 TRIM63Q969Q1 353 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 PYCR2Q96C36 320 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 NXNL1Q96CM4 212 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 FOXC2Q99958 501 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 FEM1AQ9BSK4 669 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 ST6GALNAC5Q9BVH7 336 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 PAIP1Q9H074 479 aaKnown RBP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 MMP27Q9H306 513 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 DCLRE1BQ9H816 532 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 RPF1Q9H9Y2 349 aaKnown RBP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 EIF3KQ9UBQ5 218 aaKnown RBP-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 SEC14L4Q9UDX3 406 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 SLC2A6Q9UGQ3 507 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 GPR98Q8WXG9 6306 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 MROH7-TTC4A0A0A0MT08 1334 aa-0.43□□□□□ -2.48
LMBR1-222ENST00000638959 LRP4O75096 1905 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 ZBED4O75132 1171 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 CSDE1O75534 798 aaKnown RBP-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 LYNP07948 512 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 ALPIP09923 528 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 STAG3L1P0CL83 205 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 OTX2P32243 289 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 CDH13P55290 713 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 SHROOM1Q2M3G4 852 aaPredicted RBP-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 ZNF542PQ5EBM4 170 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 DCST2Q5T1A1 773 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 CCSAPQ6IQ19 270 aaPredicted RBP-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 FUT10Q6P4F1 479 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 SMARCD3Q6STE5 483 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 PRUNE1Q86TP1 453 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 FTMTQ8N4E7 242 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 SPATA5Q8NB90 893 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 NEIL2Q969S2 332 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 C16orf58Q96GQ5 468 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 OR10C1Q96KK4 312 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 NRIP2Q9BQI9 281 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 TSSK1BQ9BXA7 367 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 TRIM7Q9C029 511 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 MED17Q9NVC6 651 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 RPS6KA6Q9UK32 745 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 ANGPTL2Q9UKU9 493 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 NCKAP1Q9Y2A7 1128 aa-0.44□□□□□ -2.48
LMBR1-222ENST00000638959 TUBGCP6Q96RT7 1819 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms