RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 A0A1W2PPM1 405 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 A0A1W2PRS3 328 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 A0A1W2PS29 197 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 SMIM23A6NLE4 172 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 KIR3DP1A8MWS1 328 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 MANBAO00462 879 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 GUCY1B2O75343 617 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 KRT6AP02538 564 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 KRT6BP04259 564 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 IMPDH1P20839 514 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 HMOX2P30519 316 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 DCTP40126 519 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 SLCO1A2P46721 670 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 KRT6CP48668 564 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 PRKAA2P54646 552 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 PIGGQ5H8A4 983 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 GOLM1Q8NBJ4 401 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 OR4K14Q8NGD5 310 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 ITLN2Q8WWU7 325 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 SGCZQ96LD1 299 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 GTF3C1Q12789 2109 aa15.5■□□□□ 0.07
CACNA1A-259ENST00000638114 NOTCH2Q04721 2471 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 PINLYPA6NC86 204 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 FAM166BA8MTA8 275 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 FOXO6A8MYZ6 492 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 ACOT7O00154 380 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 GLRA3O75311 464 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 KRT15P19012 456 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 GALNSP34059 522 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 SLC37A1P57057 533 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 GALNT1Q10472 559 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 TBL3Q12788 808 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 CMPK2Q5EBM0 449 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 C6orf163Q5TEZ5 329 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 RPTNQ6XPR3 784 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 BNC2Q6ZN30 1099 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 GK5Q6ZS86 529 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 MRGPRGQ86SM5 289 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 CHERPQ8IWX8 916 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 GALNT12Q8IXK2 581 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 C1orf52Q8N6N3 182 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 METTL6Q8TCB7 284 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 L3HYPDHQ96EM0 354 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 FAM173AQ9BQD7 235 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 WWTR1Q9GZV5 400 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 SACM1LQ9NTJ5 587 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 VPS29Q9UBQ0 182 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 EMCNQ9ULC0 261 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 STK38LQ9Y2H1 464 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 PCNX1Q96RV3 2341 aa15.49■□□□□ 0.07
CACNA1A-259ENST00000638114 EML6Q6ZMW3 1958 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 A0A1B0GTH9 108 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 C1orf226A1L170 272 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 OR6C76A6NM76 312 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PRSS44E7EML9 344 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PRRG2O14669 202 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PDE9AO76083 593 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 NADKO95544 446 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 P04436 131 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 CCL3P10147 92 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 MYL2P10916 166 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 HSD3B1P14060 373 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 CNR1P21554 472 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 NT5EP21589 574 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 HSD3B2P26439 372 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 TNFRSF8P28908 595 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 SSTR4P31391 388 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PTGS2P35354 604 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 XKP51811 444 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PPIAP62937 165 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 CSTF3Q12996 717 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 LCP2Q13094 533 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 EBPQ15125 230 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 FGD2Q7Z6J4 655 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 MMP21Q8N119 569 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 ZNF808Q8N4W9 903 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 SLC15A4Q8N697 577 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 CCNYL1Q8N7R7 359 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 OR52N2Q8NGI0 321 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 AGAP11Q8TF27 550 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 DEFB127Q9H1M4 99 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PPCSQ9HAB8 311 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 CXorf21Q9HAI6 301 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 MEMO1Q9Y316 297 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 PCDHA9Q9Y5H5 950 aa15.48■□□□□ 0.07
CACNA1A-259ENST00000638114 ULK1O75385 1050 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 ERAL1O75616 437 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 CLPSP04118 112 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 ENO1P06733 434 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 TPOP07202 933 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 CT62P0C5K7 136 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 CPMP14384 443 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 CHN1P15882 459 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 PORP16435 677 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 DNASE1L1P49184 302 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 HTR6P50406 440 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 PKNOX1P55347 436 aa15.47■□□□□ 0.07
CACNA1A-259ENST00000638114 ADORA2A-AS1P86434 159 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms