RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 WDR92Q96MX6 357 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 AMBRA1Q9C0C7 1298 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 SLIRPQ9GZT3 109 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 FAM120CQ9NX05 1096 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 TESMINQ9Y4I5 508 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 COL4A2P08572 1712 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 PLXND1Q9Y4D7 1925 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 H0YAE9 185 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 PLPP1O14494 284 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 CREG1O75629 220 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 SNRNP200O75643 2136 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 PRKD3O94806 890 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 SEMA4FO95754 770 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 IL3P08700 152 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 DBTP11182 482 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 SFTPCP11686 197 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 ICAM2P13598 275 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 GZMMP51124 257 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 CSNK1G2P78368 415 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 PPP1R8Q12972 351 aaKnown RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 STEAP3Q658P3 488 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 KCTD20Q7Z5Y7 419 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 GLRX5Q86SX6 157 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 SLC9B2Q86UD5 537 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 CCDC28AQ8IWP9 274 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 RAB42Q8N4Z0 105 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 FAR1Q8WVX9 515 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 GAS2L1Q99501 681 aaPredicted RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 PHF7Q9BWX1 381 aaPredicted RBP10.93□□□□□ -0.66
CLN6-217ENST00000636964 REEP4Q9H6H4 257 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 GIMAP4Q9NUV9 329 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 BAG5Q9UL15 447 aa10.93□□□□□ -0.66
CLN6-217ENST00000636964 PRR19A6NJB7 356 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 DYRK3O43781 588 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ALPLP05186 524 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 NUDT7P0C024 238 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 SEPHS1P49903 392 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 GNG2P59768 71 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 NCS1P62166 190 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 CHRNEQ04844 493 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PRDX1Q06830 199 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 Q6ZSR6 202 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 SFTPA2Q8IWL1 248 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 HS3ST5Q8IZT8 346 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 DEFB119Q8N690 84 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ANGPTL6Q8NI99 470 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PSMA8Q8TAA3 256 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLN6-217ENST00000636964 S100ZQ8WXG8 99 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 PITHD1Q9GZP4 211 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 PRO3102Q9H379 93 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TPT1P8Q9HAU6 139 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 C5AR2Q9P296 337 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PCOLCE2Q9UKZ9 415 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 SERPINA1P01009 418 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 UMPSP11172 480 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PXNP49023 591 aaPredicted RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 ALDH9A1P49189 494 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ARHGDIAP52565 204 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ARSFP54793 590 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 CHRNB3Q05901 458 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 GAB1Q13480 694 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 NPTX1Q15818 432 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 KHDRBS2Q5VWX1 349 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 C16orf54Q6UWD8 224 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ZNF852Q6ZMS4 543 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 CALHM3Q86XJ0 350 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 FBXL6Q8N531 539 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 CELF2-AS1Q8N7Q2 184 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 AMER3Q8N944 861 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PIK3C3Q8NEB9 887 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 OR13H1Q8NG92 308 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 DNAJB8Q8NHS0 232 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TOE1Q96GM8 510 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 WACQ9BTA9 647 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TPSD1Q9BZJ3 242 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 GORASP2Q9H8Y8 452 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 CPNE5Q9HCH3 593 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ABCB10Q9NRK6 738 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 NAALAD2Q9Y3Q0 740 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 ISM1B1AKI9 464 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 C6orf47O95873 294 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 FURINP09958 794 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PKLRP30613 574 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 HBA1P69905 142 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 MPEG1Q2M385 716 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 LAIR1Q6GTX8 287 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 TRIM69Q86WT6 500 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 DCP2Q8IU60 420 aaKnown RBP10.92□□□□□ -0.66
CLN6-217ENST00000636964 NLGN4XQ8N0W4 816 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 OR5AK3PQ8NH89 298 aa10.92□□□□□ -0.66
CLN6-217ENST00000636964 PATE1Q8WXA2 126 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms