RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 GMNNO75496 209 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MTRF1O75570 445 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZFAND5O76080 213 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 HSPA4LO95757 839 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 BAG3O95817 575 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 IGKV3-15P01624 115 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MT-ND1P03886 318 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 VTNP04004 478 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MELTFP08582 738 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 QDPRP09417 244 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KRTAP1-4P0C5Y4 121 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD34CP0C6C1 535 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GP9P14770 177 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CPA3P15088 417 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C4BPBP20851 252 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PIK3R1P27986 724 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PSMB4P28070 264 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PPP2R1AP30153 589 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TLX1P31314 330 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RPL9P32969 192 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FEN1P39748 380 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ID1P41134 155 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 OR3A3P47888 321 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KCNJ1P48048 391 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ATP4BP51164 291 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF41P51814 821 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 NDST2P52849 883 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RAD23AP54725 363 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 MFAP3P55082 362 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GSCP56915 257 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ABCE1P61221 599 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TRA2BP62995 288 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GSTO1P78417 241 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FKBP3Q00688 224 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SCN1BQ07699 218 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RBBP4Q09028 425 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CETN1Q12798 172 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RIGQ13278 110 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TNK1Q13470 666 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CRMP1Q14194 572 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF273Q14593 569 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZNF146Q15072 292 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 UGCGQ16739 394 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM44Q2T9K0 475 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CNPY1Q3B7I2 92 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM174BQ3ZCQ3 159 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 HIGD2BQ4VC39 106 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 LBHQ53QV2 105 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC158Q5M9N0 1113 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C6orf136Q5SQH8 315 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM91A1Q658Y4 838 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM166AQ6J272 317 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CAVIN1Q6NZI2 390 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC27A4Q6P1M0 643 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ALKBH5Q6P6C2 394 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PRSS55Q6UWB4 352 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PP632Q6XCG6 107 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TMEM182Q6ZP80 229 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C17orf107Q6ZR85 190 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C15orf52Q6ZUT6 534 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KRT74Q7RTS7 529 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TIPARPQ7Z3E1 657 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SPATA19Q7Z5L4 167 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CPEB2Q7Z5Q1 589 aaKnown RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 C5orf24Q7Z6I8 188 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SLFN11Q7Z7L1 901 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SLC47A2Q86VL8 602 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ANKRD46Q86W74 232 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZFAND4Q86XD8 727 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 VSIG1Q86XK7 387 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CATSPERDQ86XM0 798 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 HPS6Q86YV9 775 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ERC1Q8IUD2 1116 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CCDC60Q8IWA6 550 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 THNSL1Q8IYQ7 743 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ZBED8Q8IZ13 594 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 SIX6OS1Q8N1H7 587 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ABHD12Q8N2K0 398 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ELMOD1Q8N336 334 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 POM121L12Q8N7R1 296 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 OR10G7Q8NGN6 311 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 OR13C5Q8NGS8 318 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 OR4Q3Q8NH05 313 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 KIAA1524Q8TCG1 905 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 LRRC15Q8TF66 581 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CASP10Q92851 521 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ST6GALNAC6Q969X2 333 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 OPTNQ96CV9 577 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ERP27Q96DN0 273 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GDAP1L1Q96MZ0 367 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 FAM218AQ96MZ4 157 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 GUCD1Q96NT3 240 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 TNFRSF13CQ96RJ3 184 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 INTS14Q96SY0 518 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PCDHB18PQ96TA0 734 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 PSMB7Q99436 277 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 ATF6BQ99941 703 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 CITED2Q99967 270 aaPredicted RBP0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 INPP5KQ9BT40 448 aa0.9□□□□□ -2.27
SMARCB1-209ENST00000635578 RPP25Q9BUL9 199 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms