RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ADGRE2Q9UHX3 823 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 ANGPTL3Q9Y5C1 460 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 CHCHD2Q9Y6H1 151 aaPredicted RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 GLOD5A6NK44 160 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 WASHC1A8K0Z3 465 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 SYT5O00445 386 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 PLPP1O14494 284 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 TRAPPC6AO75865 159 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 FAM155BO75949 473 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 EPB42P16452 691 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 BMP5P22003 454 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 SPRP35270 261 aaPredicted RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 BUD31P41223 144 aaPredicted RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 WNT3P56703 355 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 DLG1Q12959 904 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 CALCOCO2Q13137 446 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 SLMAPQ14BN4 828 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 KRTAP21-3Q3LHN1 58 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 GRTP1Q5TC63 336 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 GRHL2Q6ISB3 625 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 TMEM64Q6YI46 380 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 SEM1Q6ZVN7 128 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 CMC1Q7Z7K0 106 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 TBC1D1Q86TI0 1168 aaPredicted RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 TEX9Q8N6V9 391 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 GOT1L1Q8NHS2 421 aaPredicted RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 RIT1Q92963 219 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 LRRC46Q96FV0 321 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 RMND5BQ96G75 393 aaPredicted RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 RASSF1Q9NS23 344 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 QPCTLQ9NXS2 382 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 CNOT11Q9UKZ1 510 aaKnown RBP17.43■□□□□ 0.38
SMN2-215ENST00000628696 PLEKHA6Q9Y2H5 1048 aa17.43■□□□□ 0.38
SMN2-215ENST00000628696 MAP1AP78559 2803 aaPredicted RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 ANKHD1Q8IWZ3 2542 aaKnown RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 FAM159BA6NKW6 160 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 DVL2O14641 736 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 PROM1O43490 865 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 KERAO60938 352 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 GPR75O95800 540 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 KLK2P20151 261 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 DNASE1P24855 282 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 RPS13P62277 151 aaKnown RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 CBLBQ13191 982 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 DUSP8Q13202 625 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 TMEM198Q66K66 360 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 CYP20A1Q6UW02 462 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 TAGAPQ8N103 731 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 ZCCHC7Q8N3Z6 543 aaKnown RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 PPM1NQ8N819 430 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 RELL2Q8NC24 303 aaPredicted RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 TNIP2Q8NFZ5 429 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 UBTD2Q8WUN7 234 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 DIO2Q92813 273 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 ATOH8Q96SQ7 321 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 NAPGQ99747 312 aaPredicted RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 PELOQ9BRX2 385 aaKnown RBP17.42■□□□□ 0.38
SMN2-215ENST00000628696 CXXC4Q9H2H0 198 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 KCNF1Q9H3M0 494 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 DMRT3Q9NQL9 472 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 PCDHGB3Q9Y5G1 929 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 ACANP16112 2415 aa17.42■□□□□ 0.38
SMN2-215ENST00000628696 FAM221AA4D161 298 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 AHRRA9YTQ3 701 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 KDM4EB2RXH2 506 aaPredicted RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 EIF3HO15372 352 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMN2-215ENST00000628696 EEDO75530 441 aaKnown RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 C1QAP02745 245 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 LTA4HP09960 611 aaKnown RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 SLC35E2BP0CK96 405 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 PTX3P26022 381 aaPredicted RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 PEX19P40855 299 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 PIK3CBP42338 1070 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 ASCL1P50553 236 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 DGKQP52824 942 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 SLC37A1P57057 533 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 EBPQ15125 230 aaKnown RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 NTRK2Q16620 822 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 SPRED3Q2MJR0 410 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 CDC20BQ86Y33 519 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 NAXEQ8NCW5 288 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 NXNL1Q96CM4 212 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 ZNF597Q96LX8 424 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 ACTR8Q9H981 624 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 WDR41Q9HAD4 459 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 LYARQ9NX58 379 aaKnown RBP17.41■□□□□ 0.38
SMN2-215ENST00000628696 EDARQ9UNE0 448 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 PCDHGA11Q9Y5H2 935 aa17.41■□□□□ 0.38
SMN2-215ENST00000628696 C2orf92A0A1B0GVN3 265 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 A0A1W2PR48 441 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 OR6C76A6NM76 312 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 A6NNC1 897 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 CAPN14A8MX76 684 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 TP53I11O14683 189 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 TRIM3O75382 744 aaPredicted RBP17.4■□□□□ 0.38
SMN2-215ENST00000628696 ACSL3O95573 720 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 EPPINO95925 133 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 FAM58BPP0C7Q3 252 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 NR2F6P10588 404 aa17.4■□□□□ 0.38
SMN2-215ENST00000628696 CRABP2P29373 138 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms