RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	RABIF	P47224	123 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	JAM2	P57087	298 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	CRYZ	Q08257	329 aa	Known RBP	13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	CATSPERE	Q5SY80	951 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	IGFN1	Q86VF2	1251 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	MTMR14	Q8NCE2	650 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	OR2S2	Q9NQN1	319 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	ZNF358	Q9NW07	568 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	HRH2	P25021	359 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	STK19	P49842	368 aa	Predicted RBP	13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	CCDC58	Q4VC31	144 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	MRPL21	Q7Z2W9	205 aa	Known RBP	13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	OR9A4	Q8NGU2	314 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	FAXDC2	Q96IV6	333 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	PIAS3	Q9Y6X2	628 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	ADA	P00813	363 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM225B	P0DP42	221 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	SAMD12	Q8N8I0	201 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672		Q9Y3F1	56 aa		13.29	□□□□□ -0.28
NRXN1-222	ENST00000625672	ANKRD33B	A6NCL7	494 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM233	B4DJY2	109 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	KANK2	Q63ZY3	851 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	RPL13AP3	Q6NVV1	102 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	FAM3C	Q92520	227 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	NSUN3	Q9H649	340 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	GNG13	Q9P2W3	67 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	PRSS51	A0A1B0GVH4	220 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	COCH	O43405	550 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	SOCS5	O75159	536 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	STK17B	O94768	372 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	ZNF14	P17017	642 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	AKR1C4	P17516	323 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	NR0B2	Q15466	257 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	HAGHL	Q6PII5	290 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	FIGNL1	Q6PIW4	674 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CARM1	Q86X55	608 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	WDSUB1	Q8N9V3	476 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	NPLOC4	Q8TAT6	608 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM185B	Q9H7F4	350 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CD72	P21854	359 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	ZNF81	P51508	661 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	HNRNPA0	Q13151	305 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM53	Q6P2H8	277 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	OR5B2	Q96R09	309 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	SYT4	Q9H2B2	425 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	FAM86C1	Q9NVL1	165 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	YY2	O15391	372 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	RHD	Q02161	417 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TRAM1	Q15629	374 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	SFXN2	Q96NB2	322 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	EMC8	O43402	210 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	THEGL	P0DJG4	465 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	PNMT	P11086	282 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TLE3	Q04726	772 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	PDSS2	Q86YH6	399 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	PSD4	Q8NDX1	1056 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	RPF2	Q9H7B2	306 aa	Known RBP	13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	ZDHHC2	Q9UIJ5	367 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CAMK2A	Q9UQM7	478 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TRBV2	A0A0J9YWF9	115 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CLCA1	A8K7I4	914 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CLN5	O75503	358 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	MT-CO2	P00403	227 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	DLST	P36957	453 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	DSC1	Q08554	894 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	MZT1	Q08AG7	82 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	LPAR4	Q99677	370 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	CD320	Q9NPF0	282 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM248	Q9NWD8	314 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	SLC45A1	Q9Y2W3	748 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	TMEM14A	Q9Y6G1	99 aa		13.28	□□□□□ -0.28
NRXN1-222	ENST00000625672	AGL	P35573	1532 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672		H3BML4	177 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	TNFSF12	O43508	249 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	ITM2A	O43736	263 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	MT-ND2	P03891	347 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	MAS1	P04201	325 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	YES1	P07947	543 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	NFE2L1	Q14494	772 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	EBF4	Q9BQW3	602 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672		A0A0U1RQK1	487 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672		A0A1W2PPW3	197 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	BCAS2	O75934	225 aa	Predicted RBP	13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	HOXD8	P13378	290 aa	Predicted RBP	13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	RRAS2	P62070	204 aa	Predicted RBP	13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	GPR17	Q13304	367 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	KCNA7	Q96RP8	456 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	SULT4A1	Q9BR01	284 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	GCM1	Q9NP62	436 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	IL23A	Q9NPF7	189 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	KLHL21	Q9UJP4	597 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	OR1A2	Q9Y585	309 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	AQP12B	A6NM10	295 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	NTSR1	P30989	418 aa		13.27	□□□□□ -0.28
NRXN1-222	ENST00000625672	PTGR1	Q14914	329 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms