RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CD180Q99467 661 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 MAPKAP1Q9BPZ7 522 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 TBC1D17Q9HA65 648 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 KRT84Q9NSB2 600 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 KLHL20Q9Y2M5 609 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 U3KQV3 271 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 TRIOBPQ9H2D6 2365 aa15.43■□□□□ 0.06
LDB3-208ENST00000623007 B4DGG1 531 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 LMO7DNF2Z398 122 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 AXIN1O15169 862 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 PGRMC2O15173 223 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 PPM1DO15297 605 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 SLC28A2O43868 658 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 GNAO1P09471 354 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 NR2F1P10589 423 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 HOXB3P14651 431 aaPredicted RBP15.42■□□□□ 0.06
LDB3-208ENST00000623007 HOXA6P31267 233 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 LIM2P55344 173 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 KCNAB2Q13303 367 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 ZCCHC12Q6PEW1 402 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 TRIM73Q86UV7 250 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 C11orf74Q86VG3 221 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 C17orf82Q86X59 251 aaPredicted RBP15.42■□□□□ 0.06
LDB3-208ENST00000623007 DNASE2BQ8WZ79 361 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 ELP4Q96EB1 424 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 FBXL20Q96IG2 436 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 ZNF354BQ96LW1 612 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 SLC38A3Q99624 504 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 OR51I1Q9H343 314 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 ZNF556Q9HAH1 456 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 SMURF2Q9HAU4 748 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 CACYBPQ9HB71 228 aaKnown RBP15.42■□□□□ 0.06
LDB3-208ENST00000623007 KCMF1Q9P0J7 381 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 C5AR2Q9P296 337 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 SEC14L3Q9UDX4 400 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 SLC9A8Q9Y2E8 581 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 POFUT2Q9Y2G5 429 aa15.42■□□□□ 0.06
LDB3-208ENST00000623007 C4orf51C9J302 202 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 MRPS14O60783 128 aaKnown RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 MFN2O95140 757 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 C1QCP02747 245 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 CDH3P22223 829 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 RRM2P31350 389 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 XCR1P46094 333 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 CAPZBP47756 277 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 HLCSP50747 726 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 IST1P53990 364 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 C21orf59P57076 290 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 NXPH1P58417 271 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 CXCR4P61073 352 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ZP2Q05996 745 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TCEA2Q15560 299 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 DEFB134Q4QY38 66 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 RNF220Q5VTB9 566 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ZNF691Q5VV52 312 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 GARNL3Q5VVW2 1013 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 C18orf63Q68DL7 685 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 OGFOD3Q6PK18 319 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TSPYL5Q86VY4 417 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 CCDC116Q8IYX3 515 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ARL14Q8N4G2 192 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 C19orf47Q8N9M1 422 aaKnown RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 PMM1Q92871 262 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 MUS81Q96NY9 551 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 MS4A4EQ96PG1 132 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ACTRT3Q9BYD9 372 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 FOXQ1Q9C009 403 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 DUSP15Q9H1R2 295 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 ERVMER34-1Q9H9K5 563 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TRPC4Q9UBN4 977 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TMEFF2Q9UIK5 374 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 LYVE1Q9Y5Y7 322 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 GPC6Q9Y625 555 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 CSNK1G3Q9Y6M4 447 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 A0A087WV62 115 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TMEM229AB2RXF0 380 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 BCKDKO14874 412 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 AQP9O43315 295 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 OXSR1O95747 527 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 CCDC159P0C7I6 412 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ATP6V1B1P15313 513 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 KCNJ5P48544 419 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 NUP107P57740 925 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 BIKQ13323 160 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 MICAQ29983 383 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 ZIK1Q3SY52 487 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 ZNF542PQ5EBM4 170 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 SZRD1Q7Z422 152 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TMEM179BQ7Z7N9 219 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 FAM160A2Q8N612 972 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 NUP43Q8NFH3 380 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 XAGE5Q8WWM1 108 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 PATE1Q8WXA2 126 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 C10orf90Q96M02 699 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 MBOAT4Q96T53 435 aa15.41■□□□□ 0.06
LDB3-208ENST00000623007 TREX2Q9BQ50 279 aaPredicted RBP15.41■□□□□ 0.06
LDB3-208ENST00000623007 TUBA1CQ9BQE3 449 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms