RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 AADACL2Q6P093 401 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MON1BQ7L1V2 547 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MTMR14Q8NCE2 650 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR13J1Q8NGT2 312 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PPTC7Q8NI37 304 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RELTQ969Z4 430 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 BIRC7Q96CA5 298 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MSI2Q96DH6 328 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR2M2Q96R28 347 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TRIB3Q96RU7 358 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 NPLQ9BXD5 320 aaPredicted RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR52A5Q9H2C5 316 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR51I1Q9H343 314 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PRSS44E7EML9 344 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 UBFD1O14562 309 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PTPN2P17706 415 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PBX1P40424 430 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RAB11BQ15907 218 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 GAREM2Q75VX8 874 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 KBTBD6Q86V97 674 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 NRROSQ86YC3 692 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR6T1Q8NGN1 323 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ALG3Q92685 438 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 UPRTQ96BW1 309 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PLD4Q96BZ4 506 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SLC6A7Q99884 636 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TTPALQ9BTX7 342 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SLC2A11Q9BYW1 496 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ABCB8Q9NUT2 735 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM248Q9NWD8 314 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 EIF2B4Q9UI10 523 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CHD4Q14839 1912 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PSMD10O75832 226 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 POP4O95707 220 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 IL33O95760 270 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RAC2P15153 192 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 BLKP51451 505 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TAS2R40P59535 323 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DECR1Q16698 335 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CCNJQ5T5M9 372 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SLC39A4Q6P5W5 647 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SLC29A4Q7RTT9 530 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TRAM1L1Q8N609 369 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CAMKVQ8NCB2 501 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR5H2Q8NGV7 314 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SPPL2BQ8TCT7 592 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 THEM6Q8WUY1 208 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 Q9N2J8 555 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 KCNMB3Q9NPA1 279 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF230Q9UIE0 474 aaPredicted RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM150BA6NC51 233 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 RNF212BA8MTL3 300 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LYRM1O43325 122 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF254O75437 659 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CLN5O75503 358 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TRAPPC6AO75865 159 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 LPLP06858 475 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CKMT2P17540 419 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GDI1P31150 447 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MARCKSL1P49006 195 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 DLX5P56178 289 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF33AQ06730 810 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 GANABQ14697 944 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ELP2Q6IA86 826 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 METAP1DQ6UB28 335 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PLPPR4Q7Z2D5 763 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MRIQ9BWK5 157 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 EVA1AQ9H8M9 152 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MRPS30Q9NP92 439 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZCCHC3Q9NUD5 404 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CCM2LQ9NUG4 571 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 KCNIP1Q9NZI2 227 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ANKMY1Q9P2S6 941 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 KCNS2Q9ULS6 477 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PADI3Q9ULW8 664 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MAP2P11137 1827 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ACOT7O00154 380 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 INSIG1O15503 277 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 RHOP08100 348 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 UGT2B7P16662 529 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF16P17020 682 aaPredicted RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 CD9P21926 228 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 HTR1EP28566 365 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PRKAR1BP31321 381 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 EVI2BP34910 448 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 RPL23AP62750 156 aaKnown RBP6.88□□□□□ -1.31
COLCA1-205ENST00000620864 MELKQ14680 651 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 PPA1Q15181 289 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 SDHAF4Q5VUM1 108 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 RHBDF2Q6PJF5 856 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ANKRD46Q86W74 232 aa6.88□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF440Q8IYI8 595 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms