RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 FGF3P11487 239 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 HSD17B1P14061 328 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 AKR1A1P14550 325 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 IFNGR1P15260 489 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 HIST1H1BP16401 226 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 HNF1AP20823 631 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 S1PR1P21453 382 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 COMTP21964 271 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ELK4P28324 431 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ALDH4A1P30038 563 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 YWHABP31946 246 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 S100A11P31949 105 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MPIP34949 423 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PTPN7P35236 360 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 THBS2P35442 1172 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MAP3K8P41279 467 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MAGEA6P43360 314 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 KCNJ3P48549 501 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CSNK1DP48730 415 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MARCKSL1P49006 195 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 DHPSP49366 369 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 CSNK1EP49674 416 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 ATP4BP51164 291 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CYP2J2P51589 502 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TAS2R40P59535 323 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 RAP1BP61224 184 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 RBX1P62877 108 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 VAMP2P63027 116 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 GPC5P78333 572 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SLC35A2P78381 396 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 HTD2P86397 168 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MC2RQ01718 297 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 EMX1Q04741 257 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 LIPEQ05469 1076 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 FOXM1Q08050 763 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MAP4K2Q12851 820 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ELAVL2Q12926 359 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 TSPAN31Q12999 210 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PRKAA1Q13131 559 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 NAE1Q13564 534 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PEX6Q13608 980 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 DGCR6Q14129 220 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 FGFBP1Q14512 234 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PRPSAP1Q14558 356 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 KIR3DS1Q14943 382 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TBCEQ15813 527 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 HAGHQ16775 308 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ZNF630Q2M218 657 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 DEFB115Q30KQ5 88 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 VPS26BQ4G0F5 336 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SBK1Q52WX2 424 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 FNDC3BQ53EP0 1204 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 C9orf64Q5T6V5 341 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ARMC12Q5T9G4 340 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TDRD10Q5VZ19 366 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 RAP1GAP2Q684P5 730 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CLEC6AQ6EIG7 209 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 JADE1Q6IE81 842 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MED27Q6P2C8 311 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ATRAIDQ6UW56 229 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 FAM198BQ6UWH4 519 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 RBMS3Q6XE24 437 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 HSDL2Q6YN16 418 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 C3P1Q6ZMU1 363 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MEX3BQ6ZN04 569 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 CHST15Q7LFX5 561 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 CHST3Q7LGC8 479 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SLC16A14Q7RTX9 510 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SLC46A3Q7Z3Q1 461 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SLC26A11Q86WA9 606 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 RFX6Q8HWS3 928 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 DCUN1D3Q8IWE4 304 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TMEM192Q8IY95 271 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TMEM132CQ8N3T6 1108 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 LRRC18Q8N456 261 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SLC44A3Q8N4M1 653 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PQLC3Q8N755 202 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 C4orf32Q8N8J7 132 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 NAXEQ8NCW5 288 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ZNF555Q8NEP9 628 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 OR5M1Q8NGP8 315 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 OR9A2Q8NGT5 310 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 OR2T11Q8NH01 316 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 OR5J2Q8NH18 312 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 WDR20Q8TBZ3 569 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PAQR8Q8TEZ7 354 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CA5BP1Q8WTZ4 195 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 SELENOMQ8WWX9 145 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 KAT2AQ92830 837 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 UCN3Q969E3 161 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ROPN1LQ96C74 230 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MRPL38Q96DV4 380 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 PDLIM5Q96HC4 596 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 EAF1Q96JC9 268 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 FAM210BQ96KR6 192 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 RPL10LQ96L21 214 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 MARK4Q96L34 752 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 C3orf30Q96M34 536 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms