RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 NECTIN3Q9NQS3 549 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 SIRT3Q9NTG7 399 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-219ENST00000617757 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.57□□□□□ -1.2
TARDBP-219ENST00000617757 NDE1Q9NXR1 346 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 SLC25A37Q9NYZ2 338 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 FOXJ2Q9P0K8 574 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 VAPAQ9P0L0 249 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 IFT80Q9P2H3 777 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-219ENST00000617757 CTSFQ9UBX1 484 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 VPS4AQ9UN37 437 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 PCDHGB4Q9UN71 923 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 MMACHCQ9Y4U1 282 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 NEUROG3Q9Y4Z2 214 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 PCDHB14Q9Y5E9 798 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 PCDHGA8Q9Y5G5 932 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 PCDHGA7Q9Y5G6 932 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
TARDBP-219ENST00000617757 IGKV3D-11A0A0A0MRZ8 115 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 NVLO15381 856 aaKnown RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 TNFSF15O95150 251 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 RECKO95980 971 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 ATP1B1P05026 303 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SLC35E2P0CK97 266 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 MAOAP21397 527 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 UQCRC2P22695 453 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SLC6A2P23975 617 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SLC5A2P31639 672 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 PTGER1P34995 402 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 STT3AP46977 705 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CDK9P50750 372 aaKnown RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 GABREP78334 506 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 RHAGQ02094 409 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 HSPB3Q12988 150 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CAPRIN1Q14444 709 aaKnown RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 MINDY4Q4G0A6 757 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CPZQ66K79 652 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 NANOGP8Q6NSW7 305 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 FAM198BQ6UWH4 519 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 DNAJC14Q6Y2X3 702 aaPredicted RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 DGAT2L6Q6ZPD8 337 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 TMEM151BQ8IW70 566 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 DEFB107AQ8IZN7 70 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 ST13P4Q8IZP2 240 aaPredicted RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CLEC4FQ8N1N0 589 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 ZFP90Q8TF47 636 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 TSLPQ969D9 159 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 TMEM125Q96AQ2 219 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 FKBP10Q96AY3 582 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 PPWD1Q96BP3 646 aaKnown RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 PTCHD1Q96NR3 888 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SLC46A1Q96NT5 459 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 ANKRD27Q96NW4 1050 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SPSB2Q99619 263 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CGREF1Q99674 301 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SLC39A3Q9BRY0 314 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CADM1Q9BY67 442 aaKnown RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 VN1R1Q9GZP7 353 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 CHST8Q9H2A9 424 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 NANOGQ9H9S0 305 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 NEUROD4Q9HD90 331 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 C14orf105Q9NVL8 296 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 GPN3Q9UHW5 284 aaPredicted RBP7.56□□□□□ -1.2
TARDBP-219ENST00000617757 PADI1Q9ULC6 663 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 SEC16AO15027 2179 aa7.56□□□□□ -1.2
TARDBP-219ENST00000617757 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
TARDBP-219ENST00000617757 TCRBV16S1A1N1A0A5B0 115 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 CDRT15L2A8MXV6 281 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 C9J4A7 227 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 CLIC1O00299 241 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 PLOD2O00469 737 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 NME4O00746 187 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 DNAJC8O75937 253 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-219ENST00000617757 C1QCP02747 245 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 HEXBP07686 556 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 CT62P0C5K7 136 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 NT5EP21589 574 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 GALNSP34059 522 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 GPC1P35052 558 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 SOX18P35713 384 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 FOXL2P58012 376 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 MTPNP58546 118 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 MGAT2Q10469 447 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 GAB1Q13480 694 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 SERTAD2Q14140 314 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 SELPLGQ14242 412 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 MAP7Q14244 749 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 LTB4RQ15722 352 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 PRICKLE4Q2TBC4 344 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 DNAL1Q4LDG9 190 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 ZNF628Q5EBL2 1059 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 TMEM107Q6UX40 140 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 SHISA6Q6ZSJ9 500 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 SLC15A3Q8IY34 581 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 PRSS58Q8IYP2 241 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 KIF2BQ8N4N8 673 aa7.55□□□□□ -1.2
TARDBP-219ENST00000617757 TRIML2Q8N7C3 387 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms