RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TNFSF14O43557 240 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 HMGN2P05204 90 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 FABP3P05413 133 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SERPINB1P30740 379 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 PIGAP37287 484 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 DCTP40126 519 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 DSTNP60981 165 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 INTS11Q5TA45 600 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 RBM45Q8IUH3 476 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 SLC25A45Q8N413 288 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 MARVELD2Q8N4S9 558 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 AMER2Q8N7J2 671 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CADM4Q8NFZ8 388 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TMEM19Q96HH6 336 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 SARGQ9BW04 601 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 FAIM2Q9BWQ8 316 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR51I1Q9H343 314 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 RUBCNLQ9H714 662 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 KCMF1Q9P0J7 381 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 TMEM9Q9P0T7 183 aa7.35□□□□□ -1.23
NEK3-207ENST00000617054 CNOT11Q9UKZ1 510 aaKnown RBP7.35□□□□□ -1.23
NEK3-207ENST00000617054 OR5K4A6NMS3 321 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 RDH16O75452 317 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ALPLP05186 524 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 EPHA2P29317 976 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 GSSP48637 474 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 XKP51811 444 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 C21orf59P57076 290 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 NXPH1P58417 271 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 SHC2P98077 582 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 MAPK11Q15759 364 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 SAXO2Q658L1 398 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 KRT80Q6KB66 452 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 SLC48A1Q6P1K1 146 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 EIF3MQ7L2H7 374 aaKnown RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 CHERPQ8IWX8 916 aaKnown RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 CSNK1A1LQ8N752 337 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ARSGQ96EG1 525 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 MUS81Q96NY9 551 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 NR1H4Q96RI1 486 aaPredicted RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 PRR14Q9BWN1 585 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 OSBPL11Q9BXB4 747 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 CTPS2Q9NRF8 586 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 SMPD3Q9NY59 655 aaPredicted RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 LRIT1Q9P2V4 623 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ADAM29Q9UKF5 820 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 MAPRE3Q9UPY8 281 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 A0A0A6YYC8 382 aaPredicted RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 FAM86C2PA6NEL3 165 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 I3L1I5 382 aaPredicted RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 TPST2O60704 377 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 DRD2P14416 443 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 POU2F1P14859 743 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ALOX12P18054 663 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 MATN1P21941 496 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 SELENOWP63302 87 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 EEF1A2Q05639 463 aaKnown RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 VEZF1Q14119 521 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 LPAL2Q16609 132 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 TRMT12Q53H54 448 aaKnown RBP7.34□□□□□ -1.23
NEK3-207ENST00000617054 OR52E8Q6IFG1 317 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ERICH5Q6P6B1 374 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 COMTD1Q86VU5 262 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 CARM1Q86X55 608 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 GKN2Q86XP6 184 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 CAMKK1Q8N5S9 505 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 GAL3ST3Q96A11 431 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 NEURL3Q96EH8 262 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 C7orf34Q96L11 122 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 TOR3AQ9H497 397 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 Q9H521 79 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 OLAHQ9NV23 265 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 HCN3Q9P1Z3 774 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 DAPP1Q9UN19 280 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 AP3M1Q9Y2T2 418 aa7.34□□□□□ -1.23
NEK3-207ENST00000617054 ASCC3Q8N3C0 2202 aaKnown RBP7.34□□□□□ -1.24
NEK3-207ENST00000617054 PRKNO60260 465 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 KRT75O95678 551 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PROS1P07225 676 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 NR2F6P10588 404 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ELK4P28324 431 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 NTSP30990 170 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 RRM2P31350 389 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PCGF2P35227 344 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FRKP42685 505 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 HNRNPKP61978 463 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEK3-207ENST00000617054 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 MAP7Q14244 749 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 SUZ12Q15022 739 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 LINC01559Q495D7 138 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FOXB2Q5VYV0 432 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 OR2T5Q6IEZ7 315 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 FAM111BQ6SJ93 734 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 PRR23CQ6ZRP0 262 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 CYP4Z1Q86W10 505 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 GJD3Q8N144 294 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ZNF786Q8N393 782 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 ZCCHC7Q8N3Z6 543 aaKnown RBP7.33□□□□□ -1.24
NEK3-207ENST00000617054 OR2T29Q8NH02 315 aa7.33□□□□□ -1.24
NEK3-207ENST00000617054 VANGL1Q8TAA9 524 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms