RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SNX29P2Q8IUI4 249 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF655Q8N720 491 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 COX18Q8N8Q8 333 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 RERGQ96A58 199 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR51E2Q9H255 320 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM27Q9HBJ8 222 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 IL23AQ9NPF7 189 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SPATA6Q9NWH7 488 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEFF2Q9UIK5 374 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 LRRC72A6NJI9 287 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 KIAA0513O60268 411 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ENTPD6O75354 484 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 GTF2E2P29084 291 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SMSP52788 366 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 WSCD2Q2TBF2 565 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF852Q6ZMS4 543 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 LINC00299Q6ZSB3 139 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 EGFL6Q8IUX8 553 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 C10orf111Q8N326 155 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CLIP4Q8N3C7 705 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 VN1R2Q8NFZ6 395 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR51A7Q8NH64 312 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC38A5Q8WUX1 472 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 BCL7BQ9BQE9 202 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MYNNQ9NPC7 610 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 KRCC1Q9NPI7 259 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NFKBIL1Q9UBC1 381 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MALT1Q9UDY8 824 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDRG4Q9ULP0 352 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CORINQ9Y5Q5 1042 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 STON1Q9Y6Q2 735 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRAMEF33A0A0G2JMD5 474 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TAF4O00268 1085 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MID1O15344 667 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRAMEF10O60809 474 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TIMP1P01033 207 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CSF2P04141 144 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 IDUAP35475 653 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MLLT1Q03111 559 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRAM2Q15035 370 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FXNQ16595 210 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 MLIPQ5VWP3 458 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 KDM4DQ6B0I6 523 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NANOGNBQ7Z5D8 188 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 AKAP14Q86UN6 197 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC30A8Q8IWU4 369 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR56A1Q8NGH5 318 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARRDC3Q96B67 414 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC52A3Q9NQ40 469 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF639Q9UID6 485 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 IFT52Q9Y366 437 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRRT4C9JH25 899 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF821O75541 412 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FHP07954 510 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 DRD2P14416 443 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 HOXB2P14652 356 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 LIPAP38571 399 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 GCGRP47871 477 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 KHKP50053 298 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 EMP3P54852 163 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ABATP80404 500 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ID2Q02363 134 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 AQP6Q13520 282 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CST6Q15828 149 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CTU2Q2VPK5 515 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF691Q5VV52 312 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 LIPKQ5VXJ0 399 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 THOC7Q6I9Y2 204 aaKnown RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 KCTD7Q96MP8 289 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM210AQ96ND0 272 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PHOX2BQ99453 314 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC30A2Q9BRI3 323 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 HDHD2Q9H0R4 259 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NKIRAS2Q9NYR9 191 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 RPS6KB2Q9UBS0 482 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDOR1Q9UHB4 597 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 NRXN2Q9P2S2 1712 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAAHO00519 579 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CLEC3AO75596 197 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 RASGRP1O95267 797 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CPNE6O95741 557 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OSMP13725 252 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PORP16435 677 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 DDCP20711 480 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 HIST1H1TP22492 207 aaPredicted RBP5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 PSMB5P28074 263 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 CD40LGP29965 261 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC6A11P48066 632 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF45Q02386 682 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC35F1Q5T1Q4 408 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 TCTN3Q6NUS6 607 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 GDPGP1Q6ZNW5 385 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 RTL4Q6ZR62 310 aa5.36□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR4N5Q8IXE1 308 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms