RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SH3BGRLO75368 114 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 CYS1Q717R9 158 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 C16orf59Q7L2K0 433 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 AQP12AQ8IXF9 295 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 SETD7Q8WTS6 366 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 AHCYL2Q96HN2 611 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 SNRNP25Q9BV90 132 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 NIPAL2Q9H841 368 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 KLHL42Q9P2K6 505 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 GOLT1BQ9Y3E0 138 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 HCN4Q9Y3Q4 1203 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 MARCKSL1P49006 195 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 TMEM132BQ14DG7 1078 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 FBXO32Q969P5 355 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 NTAN1Q96AB6 310 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 RBMXL1Q96E39 390 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 ZNF317Q96PQ6 595 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 MTIF3Q9H2K0 278 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 LINC00597Q9H2U6 94 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 ADAM29Q9UKF5 820 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 RHCEP18577 417 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 EPHX2P34913 555 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 C2orf80Q0P641 193 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 GRM3Q14832 879 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 TAF1CQ15572 869 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 EXOSC6Q5RKV6 272 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 NAT16Q8N8M0 369 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 RBPMSQ93062 196 aaKnown RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 FAM84AQ96KN4 292 aa8.92□□□□□ -0.98
COL12A1-211ENST00000615798 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.92□□□□□ -0.98
COL12A1-211ENST00000615798 A0A0U1RQJ8 604 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LOC100130705A0A1B0GUX0 176 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 BRINP1O60477 761 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SEC14L2O76054 403 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RAP2BP61225 183 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CXCL9Q07325 125 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 S100A7AQ86SG5 101 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ADPRHL1Q8NDY3 354 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC25A31Q9H0C2 315 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SIRPGQ9P1W8 387 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PPP1R3CQ9UQK1 317 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LAMA4Q16363 1823 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 GADD45GO95257 159 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RD3LP0DJH9 198 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HNRNPKP61978 463 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TMEM97Q5BJF2 176 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 DEFB106AQ8N104 65 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 LFNGQ8NES3 379 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 DYRK2Q92630 601 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ZBTB8AQ96BR9 441 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 NDRG3Q9UGV2 375 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 UBFD1O14562 309 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PDGFAP04085 211 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ERCC1P07992 297 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TSFMP43897 325 aaKnown RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HTR3AP46098 478 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC10A1Q14973 349 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PPTC7Q8NI37 304 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC35B2Q8TB61 432 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ELP4Q96EB1 424 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RRAGCQ9HB90 399 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 A0A0B4J2A0 478 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 C10orf62Q5T681 223 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CES3Q6UWW8 571 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SDCBP2Q9H190 292 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MIR1-1HGQ9H1L0 117 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SHPKQ9UHJ6 478 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PI4KAP42356 2102 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MT-ND1P03886 318 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TSPAN8P19075 237 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PIN1Q13526 163 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MOGAT2Q3SYC2 334 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC29A4Q7RTT9 530 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PROKR2Q8NFJ6 384 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RAB3CQ96E17 227 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 IL4I1Q96RQ9 567 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CACNG6Q9BXT2 260 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 POMPQ9Y244 141 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 MAST2Q6P0Q8 1798 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 EEF1E1-BLOC1S5C9J1V9 151 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PIP5K1BO14986 540 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 ARAFP10398 606 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PTPRAP18433 802 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PCP4P48539 62 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 CHIT1Q13231 466 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 TTC32Q5I0X7 151 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HACD4Q5VWC8 232 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 C6orf89Q6UWU4 347 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 B3GLCTQ6Y288 498 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 OR5H2Q8NGV7 314 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 OR1S1Q8NH92 325 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 SLC2A14Q8TDB8 520 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 PDGFDQ9GZP0 370 aaPredicted RBP8.91□□□□□ -0.98
COL12A1-211ENST00000615798 RHBGQ9H310 441 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 HIF1ANQ9NWT6 349 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 COPS3Q9UNS2 423 aa8.91□□□□□ -0.98
COL12A1-211ENST00000615798 GAB2Q9UQC2 676 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms