RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ZSWIM3Q96MP5 696 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 KCTD7Q96MP8 289 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 SLC17A9Q9BYT1 436 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
SSBP2-220ENST00000615665 SEC14L4Q9UDX3 406 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
SSBP2-220ENST00000615665 MYO10Q9HD67 2058 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 OSMP13725 252 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 P2RY2P41231 377 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 ISL1P61371 349 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 GAB1Q13480 694 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 COX20Q5RI15 118 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 RAB43Q86YS6 212 aa13.35□□□□□ -0.27
SSBP2-220ENST00000615665 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
SSBP2-220ENST00000615665 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 CXorf51AA0A1B0GTR3 108 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 M0R129 80 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 CDH11P55287 796 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 LGALS3BPQ08380 585 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PRRT3Q5FWE3 981 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 WDR20Q8TBZ3 569 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 MCHR1Q99705 422 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 TMEM184CQ9NVA4 438 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PPIL1Q9Y3C6 166 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 K7ESM1 405 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 RAB36O95755 333 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 ELOAQ14241 798 aaKnown RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 KDM4DQ6B0I6 523 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 SLC36A4Q6YBV0 504 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 CXXC5Q7LFL8 322 aaKnown RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 IGFN1Q86VF2 1251 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 ASPNQ9BXN1 380 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 LTB4R2Q9NPC1 389 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 SBF1O95248 1867 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PDCD11Q14690 1871 aaKnown RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 OR52A4PA6NMU1 304 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 IGFBP4P22692 258 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PRPH2P23942 346 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 IRS1P35568 1242 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 CLK3P49761 638 aaKnown RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PTGES3Q15185 160 aaKnown RBP13.34□□□□□ -0.27
SSBP2-220ENST00000615665 ASPGQ86U10 573 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 AMIGO1Q86WK6 493 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 FAM217AQ8IXS0 508 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 SYNPOQ8N3V7 929 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 OR4K14Q8NGD5 310 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 GNPDA2Q8TDQ7 276 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 OR51V1Q9H2C8 321 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 PADI2Q9Y2J8 665 aa13.34□□□□□ -0.27
SSBP2-220ENST00000615665 FABP12A6NFH5 140 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 J3KTA2 159 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 PRKAR1AP10644 381 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 ZNF45Q02386 682 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 IL18Q14116 193 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 NKG7Q16617 165 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 SLC27A4Q6P1M0 643 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 RNF44Q7L0R7 432 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 MSRB3Q8IXL7 192 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 KLHL36Q8N4N3 616 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 OR5K2Q8NHB8 316 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.272e-6■■■□□ 15.2
SSBP2-220ENST00000615665 SH3YL1Q96HL8 342 aaPredicted RBP13.33□□□□□ -0.27
SSBP2-220ENST00000615665 BTBD1Q9H0C5 482 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 DSN1Q9H410 356 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 SLC6A13Q9NSD5 602 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 ITGB1BP2Q9UKP3 347 aa13.33□□□□□ -0.27
SSBP2-220ENST00000615665 PCDH17O14917 1159 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 KIAA0513O60268 411 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 POLR2CP19387 275 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 C21orf33P30042 268 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 ATP12AP54707 1039 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 SPHARQ15513 63 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CTU2Q2VPK5 515 aaKnown RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 ADNP2Q6IQ32 1131 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 TECPR1Q7Z6L1 1165 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 OR10H4Q8NGA5 316 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 NARS2Q96I59 477 aaKnown RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 M0R3H8 397 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CLDN4O14493 209 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CDRT1O95170 752 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 SLC15A1P46059 708 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 PHC1P78364 1004 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 ID2Q02363 134 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 SLC13A2Q13183 592 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 PIN1Q13526 163 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 UAP1L1Q3KQV9 507 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms