RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SLC11A1P49279 550 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 GDI2P50395 445 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 PPP1R3AQ16821 1122 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PXKQ7Z7A4 578 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 OR8J1Q8NGP2 316 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PROKR1Q8TCW9 393 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 PBDC1Q9BVG4 233 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 UNKLQ9H9P5 680 aaKnown RBP4.38□□□□□ -1.71
CHD9-221ENST00000615216 AMBNQ9NP70 447 aa4.38□□□□□ -1.71
CHD9-221ENST00000615216 TRAV6A0A075B6T7 132 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GXYLT2A0PJZ3 443 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 PCP4L1A6NKN8 68 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 SDHDO14521 159 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 KHNYNO15037 678 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 EEF1E1O43324 174 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 MTX2O75431 263 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 LEFTY1O75610 366 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RBBP9O75884 186 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 VNN2O95498 520 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 PCGF2P35227 344 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 DHPSP49366 369 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 CLDN8P56748 225 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 NPRL3Q12980 569 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RAB41Q5JT25 222 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RNF111Q6ZNA4 994 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CEACAM19Q7Z692 300 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 OR5T2Q8NGG2 359 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 SLC22A8Q8TCC7 542 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 DAZLQ92904 295 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 WDR92Q96MX6 357 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ARHGAP39Q9C0H5 1083 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 EXTL2Q9UBQ6 330 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GRXCR1A8MXD5 290 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 JRKO75564 520 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 IFNA5P01569 189 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CHRM5P08912 532 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 PREPP48147 710 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RIDAP52758 137 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 TLE2Q04725 743 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 SLAMF1Q13291 335 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GRM2Q14416 872 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ELAVL3Q14576 367 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 LRIT3Q3SXY7 679 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ARSKQ6UWY0 536 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 OR5L2Q8NGL0 311 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 COQ8AQ8NI60 647 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CHPT1Q8WUD6 406 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 TRUB1Q8WWH5 349 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 MAFIPQ8WZ33 124 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 HSPBAP1Q96EW2 488 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 KLHDC7BQ96G42 594 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 FCRL3Q96P31 734 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 OR4K3Q96R72 315 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 SECISBP2Q96T21 854 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 GAL3ST1Q99999 423 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 PDE7BQ9NP56 450 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GKN1Q9NS71 199 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 FAM53CQ9NYF3 392 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 PPP4R1LQ9P1A2 415 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 A0A0D9SEW6 157 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 INMT-MINDY4F8WBC2 141 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RETP07949 1114 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 UCHL1P09936 223 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GABRA3P34903 492 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 HLCSP50747 726 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ART1P52961 327 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RPS3AP61247 264 aaKnown RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 SEMG2Q02383 582 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 OC90Q02509 493 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 UNC50Q53HI1 259 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 OR4C11Q6IEV9 310 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ANKRD13BQ86YJ7 626 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 TOR1AIP2Q8NFQ8 470 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 OR5J2Q8NH18 312 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 FNDC8Q8TC99 324 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 SGTBQ96EQ0 304 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RNF38Q9H0F5 515 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 RGCCQ9H4X1 137 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GPN2Q9H9Y4 310 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 ACOT13Q9NPJ3 140 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ATPIF1Q9UII2 106 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 TAF1P21675 1872 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 H7C2Y5 167 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 IFNGR1P15260 489 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 GJA1P17302 382 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 MAP2K4P45985 399 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CRISP1P54107 249 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CLDN10P78369 228 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 MELKQ14680 651 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CCL14Q16627 93 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 TSPYL5Q86VY4 417 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 TMEM173Q86WV6 379 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
CHD9-221ENST00000615216 LAS2Q8IYD9 372 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CMTM8Q8IZV2 173 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 ZNF283Q8N7M2 679 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 CNIH3Q8TBE1 160 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 FAM46BQ96A09 425 aa4.37□□□□□ -1.71
CHD9-221ENST00000615216 KIAA1143Q96AT1 154 aaPredicted RBP4.37□□□□□ -1.71
CHD9-221ENST00000615216 MYRFLQ96LU7 910 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms