RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZFP28Q8NHY6 868 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 WDR36Q8NI36 951 aaKnown RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 DNAJB14Q8TBM8 379 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 MMABQ96EY8 250 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ZBED6CLQ96FA7 236 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CGREF1Q99674 301 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CMKLR1Q99788 373 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ARHGAP9Q9BRR9 750 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CADM1Q9BY67 442 aaKnown RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PAIP1Q9H074 479 aaKnown RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 RPF2Q9H7B2 306 aaKnown RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 NEUROD4Q9HD90 331 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 SPAG4Q9NPE6 437 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 SLC35C2Q9NQQ7 365 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 GIMAP4Q9NUV9 329 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 OCIAD1Q9NX40 245 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 ABCD2Q9UBJ2 740 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 UTS2RQ9UKP6 389 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PSME2Q9UL46 239 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 MRPS33Q9Y291 106 aaKnown RBP10.75□□□□□ -0.69
SLIRP-212ENST00000613856 PCDHGA7Q9Y5G6 932 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 GMEB1Q9Y692 573 aa10.75□□□□□ -0.69
SLIRP-212ENST00000613856 CCDC187A0A096LP49 1063 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 A0A1W2PRB8 838 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 MYO1GB0I1T2 1018 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 RFXANKO14593 260 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 PGRMC2O15173 223 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 GSC2O15499 205 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 DNAJB6O75190 326 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 PRKRAO75569 313 aaKnown RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 SCRG1O75711 98 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ONECUT2O95948 504 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 GP1BBP13224 206 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 IL10P22301 178 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 SLC6A2P23975 617 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 PPP2R1BP30154 601 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 NTSP30990 170 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ETV5P41161 510 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 RAB15P59190 212 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 DMTNQ08495 405 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 EIF3IQ13347 325 aaKnown RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 SPATS1Q496A3 300 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 BNC2Q6ZN30 1099 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ANKRD46Q86W74 232 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM126BQ8IUX1 230 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 MSRB3Q8IXL7 192 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF595Q8IYB9 648 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 CLECL1Q8IZS7 167 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 DTWD1Q8N5C7 304 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 OR8J3Q8NGG0 315 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 PSMA8Q8TAA3 256 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 OR5P2Q8WZ92 322 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 TANKQ92844 425 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 CIDECQ96AQ7 238 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 MCUR1Q96AQ8 359 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 EXOSC8Q96B26 276 aaKnown RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 MIEF2Q96C03 454 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF681Q96N22 645 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 GBP5Q96PP8 586 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 RAB3IPQ96QF0 476 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 OR1F2PQ96R84 312 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 PANX1Q96RD7 426 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 INPP5KQ9BT40 448 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 SLAMF7Q9NQ25 335 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 SLC25A37Q9NYZ2 338 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 FOXJ2Q9P0K8 574 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 HCN3Q9P1Z3 774 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 C5AR2Q9P296 337 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 DHCR7Q9UBM7 475 aaKnown RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF282Q9UDV7 671 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 ENTPD4Q9Y227 616 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 MAP4K5Q9Y4K4 846 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 TMEM184BQ9Y519 407 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-212ENST00000613856 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
SLIRP-212ENST00000613856 UNC79Q9P2D8 2635 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CLEC18AA5D8T8 446 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 GLOD5A6NK44 160 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PLD2O14939 933 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 POLR1CO15160 346 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 TIAF1O95411 115 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 C6orf47O95873 294 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 IFI6P09912 130 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 NQO1P15559 274 aaKnown RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CSNK2A2P19784 350 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 FBLP22087 321 aaKnown RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PGM1P36871 562 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CDKN2CP42773 168 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 SLC7A2P52569 658 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 KCNJ2P63252 427 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PRAMEF17Q5VTA0 474 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 ZNF385CQ66K41 422 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PWWP2BQ6NUJ5 590 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 PGM2L1Q6PCE3 622 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CLEC18BQ6UXF7 455 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 DNAJC14Q6Y2X3 702 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-212ENST00000613856 CLEC18CQ8NCF0 446 aa10.73□□□□□ -0.69
SLIRP-212ENST00000613856 OR4K14Q8NGD5 310 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms