RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 RETP07949 1114 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 T-ENOLP0DO92 83 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 HNRNPA2B1P22626 353 aaKnown RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CTGFP29279 349 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CAPZA1P52907 286 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 DIO3P55073 304 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 DUSP6Q16828 381 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 Q3ZCU0 254 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 KRT77Q7Z794 578 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 JAZF1Q86VZ6 243 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CRISPLD2Q9H0B8 497 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 IFT46Q9NQC8 304 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 SUSD2Q9UGT4 822 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 MAU2Q9Y6X3 613 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 C6orf47O95873 294 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CR2P20023 1033 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 RPL4P36578 427 aaKnown RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 RGRP47804 291 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CLCN7P51798 805 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 PTSQ03393 145 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 SNAPC1Q16533 368 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 VMACQ2NL98 169 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 TMEM236Q5W0B7 351 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 LIN54Q6MZP7 749 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 RABEPKQ7Z6M1 372 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 OAFQ86UD1 273 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 OR9I1Q8NGQ6 314 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 ELSPBP1Q96BH3 223 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 GPN2Q9H9Y4 310 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 MYNNQ9NPC7 610 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 EQTNQ9NQ60 294 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 KCNK6Q9Y257 313 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 PIAS3Q9Y6X2 628 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 TRBC2A0A5B9 178 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 PRAMEF26H0Y7S4 382 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 hCG_2039718K7EN88 272 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 EI24O14681 340 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 EMC8O43402 210 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 ARSAP15289 507 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 DUSP3P51452 185 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 AP3S2P59780 193 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 ERVFC1P60507 584 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 SLC13A2Q13183 592 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 CYBRD1Q53TN4 286 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 KHDRBS2Q5VWX1 349 aaKnown RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 OR2A12Q8NGT7 310 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 NFKBIDQ8NI38 313 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 FGF13Q92913 245 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 B3GNT2Q9NY97 397 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 THAP10Q9P2Z0 257 aaPredicted RBP8.33□□□□□ -1.08
PDE6A-204ENST00000613228 PLEKHA6Q9Y2H5 1048 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 PCDHGB7Q9Y5F8 929 aa8.33□□□□□ -1.08
PDE6A-204ENST00000613228 FAM149AA5PLN7 773 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 MID1O15344 667 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ADAM23O75077 832 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 CD2P06729 351 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 BMP2P12643 396 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 IL12BP29460 328 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ARRB1P49407 418 aaPredicted RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 FAM78AQ5JUQ0 283 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 GPR149Q86SP6 731 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 LHFPL3Q86UP9 236 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF563Q8TA94 476 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 MRPL38Q96DV4 380 aaKnown RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 DOHHQ9BU89 302 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 CRISPLD1Q9H336 500 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ANKRA2Q9H9E1 313 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 FBRSL1Q9HCM7 1045 aaKnown RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 GMEB2Q9UKD1 530 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 DLGAP4Q9Y2H0 992 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 CDC40O60508 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 RFPL3O75679 317 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 KLKB1P03952 638 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 LCN1P31025 176 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ZNF81P51508 661 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 CREB5Q02930 508 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 ST3GAL3Q11203 375 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 GBX1Q14549 363 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 OXA1LQ15070 435 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 MED22Q15528 200 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 FAM98AQ8NCA5 519 aaKnown RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 APOOQ9BUR5 198 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 P2RY12Q9H244 342 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 FAAHO00519 579 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 LDOC1O95751 146 aaPredicted RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 APOC3P02656 99 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 FHP07954 510 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 SLC2A2P11168 524 aaPredicted RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 AQP1P29972 269 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 BTN1A1Q13410 526 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 KIR2DS3Q14952 304 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
PDE6A-204ENST00000613228 KCTD20Q7Z5Y7 419 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 OR4E2Q8NGC2 313 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 OR4K14Q8NGD5 310 aa8.32□□□□□ -1.08
PDE6A-204ENST00000613228 OR52N2Q8NGI0 321 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms