RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 FAM170BA6NMN3 283 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GPR137BO60478 399 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 HNF4GQ14541 408 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RHBDF2Q6PJF5 856 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 COX15Q7KZN9 410 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 COMMD1Q8N668 190 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 FAM86B1Q8N7N1 296 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 OR4K2Q8NGD2 314 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 FAM96BQ9Y3D0 163 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TJP1Q07157 1748 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CELP19835 753 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 DDCP20711 480 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HBMQ6B0K9 141 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CMIPQ8IY22 773 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 C4orf32Q8N8J7 132 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CAMKVQ8NCB2 501 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZDHHC2Q9UIJ5 367 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 ALDOBP05062 364 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ADH1AP07327 375 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HOXB9P17482 250 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 MAGEA11P43364 429 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HMGCS2P54868 508 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 APOFQ13790 326 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CCNJQ5T5M9 372 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 MON1AQ86VX9 555 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 C2CD4AQ8NCU7 369 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZDHHC1Q8WTX9 485 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 DCUN1D4Q92564 292 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RSC1A1Q92681 617 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HS6ST2Q96MM7 605 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ACO2Q99798 780 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 ETV7Q9Y603 341 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ATRNL1Q5VV63 1379 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CYTIPO60759 359 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ECI2O75521 394 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RAD51DO75771 328 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 FXNQ16595 210 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 AARDQ4LEZ3 155 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZFAND4Q86XD8 727 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 SUN3Q8TAQ9 357 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 SLIT2O94813 1529 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZNF736B4DX44 427 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 TP73O15350 636 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZNF286BP0CG31 522 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 AMY2BP19961 511 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HSD11B1P28845 292 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 THBS3P49746 956 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GPR85P60893 370 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PPIGQ13427 754 aaKnown RBP eCLIP8.42□□□□□ -1.069e-7■■■□□ 16.4
TTC28-208ENST00000612946 CD300LGQ6UXG3 332 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ENTHD1Q8IYW4 607 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TMEM121BQ9BXQ6 578 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 TMEM100Q9NV29 134 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 DIP2CQ9Y2E4 1556 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 SLC25A14O95258 325 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 PTPRAP18433 802 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PRSS3P35030 304 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 MTNR1AP48039 350 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 UBE2KP61086 200 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TUSC3Q13454 348 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 IL17AQ16552 155 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PPP1R3AQ16821 1122 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GPRC5AQ8NFJ5 357 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RPL3LQ92901 407 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ULBP1Q9BZM6 244 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 SALL4Q9UJQ4 1053 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TMEM72A0PK05 275 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PI15O43692 258 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZNF780AO75290 641 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 UBL3O95164 117 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CLCN7P51798 805 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TAS2R30P59541 319 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 HSD11B2P80365 405 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PTPRRQ15256 657 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 PWWP2AQ96N64 755 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TAPBPLQ9BX59 468 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 J3QLW9 94 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CLDN4O14493 209 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 OR4F21O95013 312 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 ZNF19P17023 458 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 TLE4Q04727 773 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PHYHIPQ92561 330 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CRB3Q9BUF7 120 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 PAPOLGQ9BWT3 736 aaKnown RBP8.42□□□□□ -1.06
TTC28-208ENST00000612946 SLC32A1Q9H598 525 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 UNC119BA6NIH7 251 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 CCDC85CA6NKD9 419 aa8.42□□□□□ -1.06
TTC28-208ENST00000612946 GIPP09681 153 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms