RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 WDR53Q7Z5U6 358 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ISCA2Q86U28 154 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SRFBP1Q8NEF9 429 aaKnown RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 DEDD2Q8WXF8 326 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 DUSP26Q9BV47 211 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 RNF167Q9H6Y7 350 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PDP1Q9P0J1 537 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 UTS2RQ9UKP6 389 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ACSL6Q9UKU0 697 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PCDHGB6Q9Y5F9 930 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 BBIP1A8MTZ0 92 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PRAMEF26H0Y7S4 382 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SMLR1H3BR10 107 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PLD2O14939 933 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 VNN2O95498 520 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TCF3P15923 654 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CBLP22681 906 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 GADD45AP24522 165 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 OTX2P32243 289 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 FOXA1P55317 472 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 GPLD1P80108 840 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ENPP6Q6UWR7 440 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PAMR1Q6UXH9 720 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 GDPD3Q7L5L3 318 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 COMMD2Q86X83 199 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PARP16Q8N5Y8 322 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 GLB1L3Q8NCI6 653 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 NEDD4LQ96PU5 975 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 EFCAB11Q9BUY7 163 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 FKBP14Q9NWM8 211 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 THAP10Q9P2Z0 257 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SUSD2Q9UGT4 822 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 IKZF3Q9UKT9 509 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 FAM240BA0A1B0GVZ2 78 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ARHGEF33A8MVX0 844 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 C9J4A7 227 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 MBTPS2O43462 519 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PROS1P07225 676 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 KCNC1P48547 511 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 GP2P55259 537 aaKnown RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CDK10Q15131 360 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PAGE3Q5JUK9 113 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 MANEALQ5VSG8 457 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF549Q6P9A3 640 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TOR1AIP2Q8NFQ8 470 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CD200R1Q8TD46 325 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 DIRAS2Q96HU8 199 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PKP4Q99569 1192 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PSD2Q9BQI7 771 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ALOXE3Q9BYJ1 711 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PRRG4Q9BZD6 226 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CD244Q9BZW8 370 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 AKIP1Q9NQ31 210 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ACSL5Q9ULC5 683 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 RNF6Q9Y252 685 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 A0A0A6YYC8 382 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 H0YAE9 185 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 I3L1I5 382 aaPredicted RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 NPHS1O60500 1241 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 SRFP11831 508 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 IL7P13232 177 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 HOXA9P31269 272 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 CTSKP43235 329 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 OR1D4P47884 311 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 MTAPQ13126 283 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ABRAXAS2Q15018 415 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF181Q2M3W8 571 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 COX18Q8N8Q8 333 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PHF10Q8WUB8 498 aaKnown RBP10.33□□□□□ -0.76
FAM3A-221ENST00000612856 NUDT8Q8WV74 236 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 TNFRSF12AQ9NP84 129 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 C8orf4Q9NR00 106 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 MAGEL2Q9UJ55 1249 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 MAFFQ9ULX9 164 aa10.33□□□□□ -0.76
FAM3A-221ENST00000612856 PRSS38A1L453 326 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 VPS4BO75351 444 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PDGFBP01127 241 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 ZDHHC11BP0C7U3 371 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NDUFS1P28331 727 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 GANABQ14697 944 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NXNL2Q5VZ03 156 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 TYW3Q6IPR3 259 aaKnown RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NOXA1Q86UR1 476 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 CDK20Q8IZL9 346 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 POMGNT2Q8NAT1 580 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 NLGN4YQ8NFZ3 816 aaPredicted RBP10.32□□□□□ -0.76
FAM3A-221ENST00000612856 OR9Q1Q8NGQ5 310 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 UBE2FQ969M7 185 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 C5orf34Q96MH7 638 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 DERL2Q9GZP9 239 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 MMP27Q9H306 513 aa10.32□□□□□ -0.76
FAM3A-221ENST00000612856 PDE7BQ9NP56 450 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms