RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 C9orf106Q8NAJ2 232 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 UCN3Q969E3 161 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 ZNF597Q96LX8 424 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 TRIB1Q96RU8 372 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 EFCAB11Q9BUY7 163 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 CAPS2Q9BXY5 557 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 UGT2B28Q9BY64 529 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 DERL2Q9GZP9 239 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 NEUROD4Q9HD90 331 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 SMYD2Q9NRG4 433 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 ATRQ13535 2644 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 RTTNQ86VV8 2226 aa21.44■■□□□ 1.02
MMP28-203ENST00000612672 A0A1W2PS29 197 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 MBD3L4A6NDZ8 208 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 MBD3L3A6NE82 208 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 MBD3L5A6NJ08 208 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 HPNP05981 417 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 HPDP32754 393 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 SSR2P43308 183 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 SLCO1A2P46721 670 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 CDK9P50750 372 aaKnown RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 FBXW4P57775 412 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 NKX6-1P78426 367 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 SORDQ00796 357 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 FOXF2Q12947 444 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 FRG1Q14331 258 aaKnown RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 EIPR1Q53HC9 387 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 MBD3L2Q8NHZ7 208 aaPredicted RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 LRRC46Q96FV0 321 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 WDYHV1Q96HA8 205 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 ROGDIQ9GZN7 287 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 OR51B5Q9H339 312 aa21.43■■□□□ 1.02
MMP28-203ENST00000612672 RPF2Q9H7B2 306 aaKnown RBP21.43■■□□□ 1.02
MMP28-203ENST00000612672 PHGDHO43175 533 aaKnown RBP21.42■■□□□ 1.02
MMP28-203ENST00000612672 STK16O75716 305 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 TRAPPC6AO75865 159 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 ALOX15P16050 662 aaPredicted RBP21.42■■□□□ 1.02
MMP28-203ENST00000612672 BMP7P18075 431 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 PLIN5Q00G26 463 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 TNFRSF17Q02223 184 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 MGAT5Q09328 741 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 SLAMF1Q13291 335 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 ZNF267Q14586 743 aaPredicted RBP21.42■■□□□ 1.02
MMP28-203ENST00000612672 ACTRT1Q8TDG2 376 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 DIO2Q92813 273 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 HSPBAP1Q96EW2 488 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 VPS39Q96JC1 886 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 COX4I2Q96KJ9 171 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 RILPQ96NA2 401 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 GNRHR2Q96P88 292 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 MOCS1Q9NZB8 636 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 PTBP2Q9UKA9 531 aaKnown RBP21.42■■□□□ 1.02
MMP28-203ENST00000612672 PPP2R2CQ9Y2T4 447 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 C15orf41Q9Y2V0 281 aa21.42■■□□□ 1.02
MMP28-203ENST00000612672 MTO1Q9Y2Z2 717 aaKnown RBP21.42■■□□□ 1.02
MMP28-203ENST00000612672 STAB1Q9NY15 2570 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 CD8B2A6NJW9 211 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 TP73O15350 636 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 PCNAP12004 261 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 CD1DP15813 335 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 CTSSP25774 331 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 SERPINB3P29508 390 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 CASP2P42575 452 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 IRF8Q02556 426 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 TBL3Q12788 808 aaKnown RBP21.41■■□□□ 1.02
MMP28-203ENST00000612672 SPRED3Q2MJR0 410 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 AP5B1Q2VPB7 878 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 RNF111Q6ZNA4 994 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 TAOK1Q7L7X3 1001 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 GPSM1Q86YR5 675 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 LAS2Q8IYD9 372 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 TCAIMQ8N3R3 496 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 PDPRQ8NCN5 879 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 NTNG2Q96CW9 530 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 OSBPL9Q96SU4 736 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 YIPF4Q9BSR8 244 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 ZNF717Q9BY31 904 aaPredicted RBP21.41■■□□□ 1.02
MMP28-203ENST00000612672 PHACTR1Q9C0D0 580 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 RHOJQ9H4E5 214 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 ZNF395Q9H8N7 513 aaPredicted RBP21.41■■□□□ 1.02
MMP28-203ENST00000612672 POPDC3Q9HBV1 291 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 BEX4Q9NWD9 120 aaPredicted RBP21.41■■□□□ 1.02
MMP28-203ENST00000612672 JRKLQ9Y4A0 524 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 SPACA6W5XKT8 324 aa21.41■■□□□ 1.02
MMP28-203ENST00000612672 ANKRD33BA6NCL7 494 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 PLPP1O14494 284 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 CCNT2O60583 730 aaKnown RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 SSTR4P31391 388 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 TBCCQ15814 346 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 NHSL2Q5HYW2 709 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 WIPI1Q5MNZ9 446 aaPredicted RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 KHDRBS2Q5VWX1 349 aaKnown RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 SULT1C3Q6IMI6 304 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 SLC29A4Q7RTT9 530 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 KIF18BQ86Y91 864 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 DND1Q8IYX4 353 aaKnown RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 ST13P4Q8IZP2 240 aaPredicted RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 PDIK1LQ8N165 341 aa21.4■■□□□ 1.02
MMP28-203ENST00000612672 SRFBP1Q8NEF9 429 aaKnown RBP21.4■■□□□ 1.02
MMP28-203ENST00000612672 OR7G3Q8NG95 312 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms