RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 MUC22E2RYF6 1773 aaPredicted RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 SH3BGRLO75368 114 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 NDUFS6O75380 124 aaKnown RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 MLYCDO95822 493 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 FGF4P08620 206 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ABRAXAS2Q15018 415 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 TUSC1Q2TAM9 212 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 MTSS1LQ765P7 747 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ADGRG3Q86Y34 549 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ZNF547Q8IVP9 402 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 CLHC1Q8NHS4 586 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 MED8Q96G25 268 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 SIGLEC11Q96RL6 698 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 SRRQ9GZT4 340 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 CD207Q9UJ71 328 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 KNL1Q8NG31 2342 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 WASHC1A8K0Z3 465 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 WWP2O00308 870 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 KIAA0513O60268 411 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 WDR47O94967 919 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ANXA5P08758 320 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 HIST1H2AGP0C0S8 130 aaPredicted RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 HIST1H2ADP20671 130 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ERVK-8P63133 956 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 HMGCS1Q01581 520 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 BAMBIQ13145 260 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 IL18R1Q13478 541 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 WSCD2Q2TBF2 565 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 TRMT11Q7Z4G4 463 aaKnown RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 CYP4Z1Q86W10 505 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 LAX1Q8IWV1 398 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ASB12Q8WXK4 309 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 UFD1Q92890 307 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 RBPMSQ93062 196 aaKnown RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 HIST1H2AHQ96KK5 128 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 GPR137Q96N19 417 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 HIST1H2AJQ99878 128 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 C19orf43Q9BQ61 176 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 CCM2Q9BSQ5 444 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 H2AFJQ9BTM1 129 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 ZNF416Q9BWM5 594 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 RSPH9Q9H1X1 276 aaPredicted RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 ING3Q9NXR8 418 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 PRELID3BQ9Y3B1 194 aa15.18■□□□□ 0.02
RTN1-209ENST00000611068 PCDHGA9Q9Y5G4 932 aaKnown RBP15.18■□□□□ 0.02
RTN1-209ENST00000611068 TRAV20A0A0B4J274 112 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 PIPSLA2A3N6 862 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 ANKRD28O15084 1053 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SLC31A1O15431 190 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 STK16O75716 305 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 HOXB2P14652 356 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 CLCNKAP51800 687 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 MTPNP58546 118 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 RPS14P62263 151 aaKnown RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 GRIK2Q13002 908 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 FGL2Q14314 439 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 QPRTQ15274 297 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 RPS6KA2Q15349 733 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 FAM46CQ5VWP2 391 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SLC44A3Q8N4M1 653 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SGTBQ96EQ0 304 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 PIP5K1AQ99755 562 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SMURF1Q9HCE7 757 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 NDRG2Q9UN36 371 aaKnown RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 CA5BQ9Y2D0 317 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 KIAA1549LQ6ZVL6 1849 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3DA0A087WVF3 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3IA0A087WXS9 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3EA0A087X179 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3KA0A087X1G2 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3FA6NER0 549 aaPredicted RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 ARHGEF33A8MVX0 844 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3LB9A6J9 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SOX1O00570 391 aaPredicted RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 ANXA6P08133 673 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3HP0C7X1 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 BTF3P20290 206 aaKnown RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 POU1F1P28069 291 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 SOX6P35712 828 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 LIMK1P53667 647 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 ASAH1Q13510 395 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 CAMK2GQ13555 558 aaPredicted RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 PCBP2Q15366 365 aaKnown RBP eCLIP15.17■□□□□ 0.02
RTN1-209ENST00000611068 GRK1Q15835 563 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3GQ6DHY5 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3CQ6IPX1 549 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 TBC1D3Q8IZP1 549 aaPredicted RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 ZCCHC4Q9H5U6 513 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 HEXA-AS1Q9H8Q6 139 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 AMBNQ9NP70 447 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 ZFR2Q9UPR6 939 aaKnown RBP15.17■□□□□ 0.02
RTN1-209ENST00000611068 PLXNA2O75051 1894 aa15.17■□□□□ 0.02
RTN1-209ENST00000611068 YKT6O15498 198 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 DFNA5O60443 496 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 POP7O75817 140 aaKnown RBP15.16■□□□□ 0.02
RTN1-209ENST00000611068 RRASP10301 218 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 UROSP10746 265 aa15.16■□□□□ 0.02
RTN1-209ENST00000611068 NTSR1P30989 418 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms