RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NEIL3Q8TAT5 605 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 HSPA12BQ96MM6 686 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 HIST1H2AAQ96QV6 131 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 FUNDC2Q9BWH2 189 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 ACPTQ9BZG2 426 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 CDH10Q9Y6N8 788 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 OXSR1O95747 527 aaPredicted RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 CA3P07451 260 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 RNH1P13489 461 aaKnown RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 JUNDP17535 347 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 STT3AP46977 705 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 SPHARQ15513 63 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 WDR45BQ5MNZ6 344 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 FIGNL1Q6PIW4 674 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF782Q6ZMW2 699 aaPredicted RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 NEIL2Q969S2 332 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 ISG20Q96AZ6 181 aaKnown RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 TRMT2BQ96GJ1 504 aaKnown RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 APOBEC3BQ9UH17 382 aaKnown RBP13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 HSPE1-MOB4S4R3N1 261 aa13.6□□□□□ -0.23
PCDHB16-201ENST00000609684 GPR37L1O60883 481 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 HK3P52790 923 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 RPA4Q13156 261 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CTC1Q2NKJ3 1217 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 GPALPP1Q8IXQ4 340 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ADGRG5Q8IZF4 528 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 SETD6Q8TBK2 473 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ENAMQ9NRM1 1142 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 GPR83Q9NYM4 423 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ANKRD36CQ5JPF3 1778 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 GON4LQ3T8J9 2241 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 FLRT2O43155 660 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CSF2P04141 144 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ARSAP15289 507 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 DCKP27707 260 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 HOXC12P31275 282 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 TM4SF4P48230 202 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CTSCP53634 463 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF45Q02386 682 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CHAF1BQ13112 559 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CTSL3PQ5NE16 218 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 METTL2BQ6P1Q9 378 aaKnown RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 OR6N2Q8NGY6 317 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 TGM7Q96PF1 710 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 TMEM184CQ9NVA4 438 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF224Q9NZL3 707 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ENPP4Q9Y6X5 453 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 URB1O60287 2271 aaKnown RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 RNF13O43567 381 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CEBPBP17676 345 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 GPR4P46093 362 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 SLC14A2Q15849 920 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PNLDC1Q8NA58 520 aaKnown RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 OR4K5Q8NGD3 323 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 OR56A3Q8NH54 315 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 NSMAFQ92636 917 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 TCEAL4Q96EI5 215 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 NTMT1Q9BV86 223 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 GSTM2P28161 218 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 MAGEA3P43357 314 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 HTRA3P83110 453 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF234Q14588 700 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 LRIT3Q3SXY7 679 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 CIDECQ96AQ7 238 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 FUZQ9BT04 418 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 BRF2Q9HAW0 419 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PCDHGB5Q9Y5G0 923 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PIAS3Q9Y6X2 628 aa13.59□□□□□ -0.23
PCDHB16-201ENST00000609684 PLOD2O00469 737 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 MUSKO15146 869 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 ZNF432O94892 652 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 FCER2P06734 321 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 HNRNPA1L2Q32P51 320 aaKnown RBP13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 SYCE2Q6PIF2 218 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 DPPA4Q7L190 304 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 OR6N1Q8NGY5 312 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 C15orf40Q8WUR7 153 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 PDE7BQ9NP56 450 aa13.58□□□□□ -0.23
PCDHB16-201ENST00000609684 A0A1W2PRG6 482 aa13.58□□□□□ -0.24
PCDHB16-201ENST00000609684 C11orf98E9PRG8 122 aa13.58□□□□□ -0.24
PCDHB16-201ENST00000609684 KIAA0513O60268 411 aa13.58□□□□□ -0.24
PCDHB16-201ENST00000609684 ADAP00813 363 aa13.58□□□□□ -0.24
PCDHB16-201ENST00000609684 NAA10P41227 235 aaPredicted RBP13.58□□□□□ -0.24
PCDHB16-201ENST00000609684 SOX2P48431 317 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms