RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 VAC14Q08AM6 782 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 EIF3IQ13347 325 aaKnown RBP21.2■□□□□ 0.98
IRF3-228ENST00000601291 ERV3-1Q14264 604 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 HES3Q5TGS1 186 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 BHLHB9Q6PI77 547 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 RAB11FIP2Q7L804 512 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 OR2T12Q8NG77 320 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 SFXN5Q8TD22 340 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 MUC13Q9H3R2 512 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 DENND2DQ9H6A0 471 aaPredicted RBP21.2■□□□□ 0.98
IRF3-228ENST00000601291 MMACHCQ9Y4U1 282 aa21.2■□□□□ 0.98
IRF3-228ENST00000601291 FAM220BPB1ANY3 271 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SLITRK5O94991 958 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 BMP10O95393 424 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SLC35E2P0CK97 266 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 CSRP1P21291 193 aaKnown RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 HTR1EP28566 365 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 MSX2P35548 267 aaPredicted RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 PRR5P85299 388 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 TRAP1Q12931 704 aaKnown RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 FLOT2Q14254 428 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 KPNB1Q14974 876 aaKnown RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 CYP51A1Q16850 503 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 TMEM107Q6UX40 140 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 GPR155Q7Z3F1 870 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SZRD1Q7Z422 152 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SERPINA11Q86U17 422 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SLC38A9Q8NBW4 561 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 C7orf57Q8NEG2 295 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 OR52N2Q8NGI0 321 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 NETO1Q8TDF5 533 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 WDR60Q8WVS4 1066 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 NEURL3Q96EH8 262 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 ZNF583Q96ND8 569 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 PHOX2BQ99453 314 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 PIF1Q9H611 641 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 C3orf14Q9HBI5 128 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 ZCCHC3Q9NUD5 404 aaKnown RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 CROCCQ5TZA2 2017 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 A8MUI8 341 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 OR10H2O60403 315 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 IGLV3-21P80748 117 aaPredicted RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 FADDQ13158 208 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 BIKQ13323 160 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 RGNQ15493 299 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 NKAIN1Q4KMZ8 207 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 DCAF12Q5T6F0 453 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 MFSD4BQ5TF39 518 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SAXO2Q658L1 398 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 OR56A1Q8NGH5 318 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 ZPBPQ9BS86 351 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 SPATA9Q9BWV2 254 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 LANCL2Q9NS86 450 aa21.19■□□□□ 0.98
IRF3-228ENST00000601291 GMPR2Q9P2T1 348 aaKnown RBP21.19■□□□□ 0.98
IRF3-228ENST00000601291 MUC6Q6W4X9 2439 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 CCDC187A0A096LP49 1063 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 JRKO75564 520 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 FTH1P19P0C7X4 201 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 JMJD7P0C870 316 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 AGXTP21549 392 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 NT5EP21589 574 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 MC3RP41968 323 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 CRATP43155 626 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 CLDN6P56747 220 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 ACTR3P61158 418 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 NHLH1Q02575 133 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 TP53BP2Q13625 1128 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 SERTAD2Q14140 314 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 LTB4RQ15722 352 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 MINDY4Q4G0A6 757 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.18■□□□□ 0.98
IRF3-228ENST00000601291 QSOX2Q6ZRP7 698 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 SLCO6A1Q86UG4 719 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 CALHM3Q86XJ0 350 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 ZC3H7AQ8IWR0 971 aaKnown RBP21.18■□□□□ 0.98
IRF3-228ENST00000601291 ST13P4Q8IZP2 240 aaPredicted RBP21.18■□□□□ 0.98
IRF3-228ENST00000601291 ELP4Q96EB1 424 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 RNF31Q96EP0 1072 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 REXO5Q96IC2 774 aaKnown RBP21.18■□□□□ 0.98
IRF3-228ENST00000601291 MAGED4Q96JG8 741 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 PELOQ9BRX2 385 aaKnown RBP21.18■□□□□ 0.98
IRF3-228ENST00000601291 PCDHAC1Q9H158 963 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 EPS8L2Q9H6S3 715 aa21.18■□□□□ 0.98
IRF3-228ENST00000601291 EMC8O43402 210 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 BCAS2O75934 225 aaPredicted RBP21.17■□□□□ 0.98
IRF3-228ENST00000601291 DKK1O94907 266 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 ITIH1P19827 911 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 PTGER1P34995 402 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 RORAP35398 523 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 MAPK10P53779 464 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 BTG2P78543 158 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 MS4A2Q01362 244 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 OCA2Q04671 838 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 ZNF385CQ66K41 422 aaPredicted RBP21.17■□□□□ 0.98
IRF3-228ENST00000601291 CPZQ66K79 652 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 COX15Q7KZN9 410 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 C6orf120Q7Z4R8 191 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 RNF130Q86XS8 419 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 PTRH1Q86Y79 214 aaKnown RBP21.17■□□□□ 0.98
IRF3-228ENST00000601291 ADCY4Q8NFM4 1077 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms