RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 WDR47O94967 919 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 RCBTB2O95199 551 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 ACTL6AO96019 429 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 FGGP02679 453 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 PAX1P15863 534 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 PGAM1P18669 254 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 GABRB3P28472 473 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 PCYT1AP49585 367 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 TMED10P49755 219 aaKnown RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 RPP38P78345 283 aaKnown RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 BIKQ13323 160 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 GAB1Q13480 694 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 CRYMQ14894 314 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 KCTD19Q17RG1 926 aaPredicted RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 EIPR1Q53HC9 387 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 HEPHL1Q6MZM0 1159 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 RNF111Q6ZNA4 994 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 VN1R5Q7Z5H4 357 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 GALNT7Q86SF2 657 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 AGGF1Q8N302 714 aaeCLIP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 MEIOBQ8N635 442 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 ANKRD7Q92527 254 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 WNT2BQ93097 391 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 UCN3Q969E3 161 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 INTS12Q96CB8 462 aaKnown RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 GNRHR2Q96P88 292 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 MAPKAP1Q9BPZ7 522 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 TUBA1CQ9BQE3 449 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 DESI2Q9BSY9 194 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 TBCDQ9BTW9 1192 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 MED18Q9BUE0 208 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 ANGPTL4Q9BY76 406 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 EHD1Q9H4M9 534 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 PRDM7Q9NQW5 492 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 KLHL28Q9NXS3 571 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 GPRC5BQ9NZH0 403 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 IKZF3Q9UKT9 509 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 CORO1CQ9ULV4 474 aaPredicted RBP9.24□□□□□ -0.93
TRIM28-210ENST00000597618 KIAA1549Q9HCM3 1950 aa9.24□□□□□ -0.93
TRIM28-210ENST00000597618 DOCK7Q96N67 2140 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 NPEPPSL1A6NEC2 478 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 HRKO00198 91 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 TMCC2O75069 709 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 CDH16O75309 829 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SCELO95171 688 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 F12P00748 615 aaPredicted RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 AHSGP02765 367 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 CPN1P15169 458 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 CPN2P22792 545 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 CRYGSP22914 178 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ATP5A1P25705 553 aaKnown RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SLCO1A2P46721 670 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SLC6A12P48065 614 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 NAGLUP54802 743 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FBXW4P57775 412 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 HERVK_113P63132 956 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ERVK-8P63133 956 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 KRTAP1-1Q07627 177 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SPRED3Q2MJR0 410 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FNDC7Q5VTL7 733 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 BICRALQ6AI39 1079 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FAM45BPQ6NSW5 357 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ZNF793Q6ZN11 406 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 PLEKHM3Q6ZWE6 761 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FRA10AC1Q70Z53 315 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ADGRE4PQ86SQ3 457 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 OR4N5Q8IXE1 308 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ST13P4Q8IZP2 240 aaPredicted RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 GCNT2Q8N0V5 402 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ACOT4Q8N9L9 421 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 BBOF1Q8ND07 529 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FAM45AQ8TCE6 357 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SPPL2AQ8TCT8 520 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SLC44A1Q8WWI5 657 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 PPWD1Q96BP3 646 aaKnown RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 TMEM41AQ96HV5 264 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SIGLEC10Q96LC7 697 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 WFIKKN1Q96NZ8 548 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 F2RL3Q96RI0 385 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 UCN2Q96RP3 112 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 BAG1Q99933 345 aaPredicted RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 PELOQ9BRX2 385 aaKnown RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ERVK-6Q9BXR3 956 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 CXorf56Q9H5V9 222 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 SNX15Q9NRS6 342 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 TEX10Q9NXF1 929 aaPredicted RBP9.23□□□□□ -0.93
TRIM28-210ENST00000597618 FETUBQ9UGM5 382 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 ERVK-19Q9WJR5 959 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 VWA7Q9Y334 891 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 OARD1Q9Y530 152 aa9.23□□□□□ -0.93
TRIM28-210ENST00000597618 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 CDC7O00311 574 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 MSTNO14793 375 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 SNPHO15079 494 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 TNFSF13O75888 250 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 TTC4O95801 387 aa9.22□□□□□ -0.93
TRIM28-210ENST00000597618 KRT14P02533 472 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms