RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 CES1P1Q9UKY3 287 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 VPS4AQ9UN37 437 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 DNAJC15Q9Y5T4 150 aa16.08■□□□□ 0.16
SHKBP1-212ENST00000596163 OR6C76A6NM76 312 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 ITGA10O75578 1167 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 WISP1O95388 367 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 IL3P08700 152 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 SSR4P51571 173 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC18A1P54219 525 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 RNF4P78317 190 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 NR6A1Q15406 480 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 OR1C1Q15619 314 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF766Q5HY98 468 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 HDXQ7Z353 690 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 GPALPP1Q8IXQ4 340 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM156Q8N614 296 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM178AQ8NBL3 297 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TWIST2Q8WVJ9 160 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 UCN3Q969E3 161 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM125Q96AQ2 219 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 KLHL29Q96CT2 875 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 SNRNP40Q96DI7 357 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 CXorf21Q9HAI6 301 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 EHD3Q9NZN3 535 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 LRFN1Q9P244 771 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 MYOTQ9UBF9 498 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF223Q9UK11 482 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 UTS2RQ9UKP6 389 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 DOCK10Q96BY6 2186 aa16.07■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM120BA0PK00 339 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 MAN1A2O60476 641 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 IGKV3-11P04433 115 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 LINC00032P0C843 101 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 NT5EP21589 574 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 ABCE1P61221 599 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 ERVK-8P63133 956 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 C2orf80Q0P641 193 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 MPP2Q14168 576 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 IGFBP7Q16270 282 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC25A25Q6KCM7 469 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 NOXRED1Q6NXP6 359 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 FAM180AQ6UWF9 173 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 RNF111Q6ZNA4 994 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC29A4Q7RTT9 530 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 ANKRD42Q8N9B4 389 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 GALNT11Q8NCW6 608 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 NUBPLQ8TB37 319 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 TLCD1Q96CP7 247 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 PPP3R2Q96LZ3 170 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 EBPLQ9BY08 206 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 TRIM45Q9H8W5 580 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 ANKRD10Q9NXR5 420 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 ERVK-19Q9WJR5 959 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 CCL27Q9Y4X3 112 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 POLR3HQ9Y535 204 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 SCN2AQ99250 2005 aa16.06■□□□□ 0.16
SHKBP1-212ENST00000596163 RASAL1O95294 804 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 CRYABP02511 175 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ATP1B1P05026 303 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 DDCP20711 480 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 MAPK1P28482 360 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 FEN1P39748 380 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 KCNC4Q03721 635 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 STX3Q13277 289 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 SPINK14Q6IE38 97 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 DGAT2L6Q6ZPD8 337 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 Q6ZSR9 355 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 IKBIPQ70UQ0 350 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 TRIM42Q8IWZ5 723 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 LRRC25Q8N386 305 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 BCORP1Q8N888 145 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF321PQ8N8H1 164 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 FAM98AQ8NCA5 519 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 MDS2Q8NDY4 140 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 DNAJB8Q8NHS0 232 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 AGR3Q8TD06 166 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ASB15Q8WXK1 588 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 MIEF1Q9NQG6 463 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ASF1BQ9NVP2 202 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 HEY2Q9UBP5 337 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ZDHHC2Q9UIJ5 367 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 ENTPD4Q9Y227 616 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
SHKBP1-212ENST00000596163 BSNQ9UPA5 3926 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 WWP2O00308 870 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 PIP5K1BO14986 540 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 PRKNO60260 465 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms