RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PCDH7O60245 1069 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 TRIM13O60858 407 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SLC25A12O75746 678 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OR2J2O76002 312 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OR6B1O95007 311 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 RASAL1O95294 804 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CHRNGP07510 517 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SP1P08047 785 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CT62P0C5K7 136 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SLC35E2P0CK97 266 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CPMP14384 443 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 COX7A2P14406 83 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 GALNSP34059 522 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SOX3P41225 446 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CYB561P49447 251 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SLC37A1P57057 533 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 ERVK-8P63133 956 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SPIN4Q56A73 249 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CES4AQ5XG92 561 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SLC25A25Q6KCM7 469 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 GALNT18Q6P9A2 607 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 ZCCHC23Q6ZST2 131 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 GALNTL5Q7Z4T8 443 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 MDGA2Q7Z553 956 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 EXOC3L1Q86VI1 746 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 ST6GALNAC3Q8NDV1 305 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 C7orf57Q8NEG2 295 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OR4K14Q8NGD5 310 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OR6Y1Q8NGX8 325 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OR8K3Q8NH51 312 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SUN3Q8TAQ9 357 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 RBM18Q96H35 190 aaKnown RBP10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 FRMD6Q96NE9 622 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 ZIM3Q96PE6 472 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 RASL10BQ96S79 203 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SMC6Q96SB8 1091 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 EBPLQ9BY08 206 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 TUBB1Q9H4B7 451 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 CXorf21Q9HAI6 301 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 OLAHQ9NV23 265 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 SIRT5Q9NXA8 310 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 ERVK-19Q9WJR5 959 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 YARS2Q9Y2Z4 477 aaKnown RBP10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 UNC79Q9P2D8 2635 aa10.19□□□□□ -0.78
SHKBP1-206ENST00000595523 MAST4O15021 2626 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 CCDC151A5D8V7 595 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TMEM233B4DJY2 109 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 H3BQF6 201 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 OR10H2O60403 315 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 SEMA7AO75326 666 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 NADKO95544 446 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TUBBP07437 444 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 IL3P08700 152 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 RNF224P0DH78 156 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 UROSP10746 265 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 EDN3P14138 238 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 CD46P15529 392 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 PIK3R1P27986 724 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 SSTR4P31391 388 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TIA1P31483 386 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 PTGER1P34995 402 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 SSR4P51571 173 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 XKP51811 444 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TRA2BP62995 288 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 BTKQ06187 659 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 ACSM2AQ08AH3 577 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 MGAT2Q10469 447 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 UBAP2LQ14157 1087 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF267Q14586 743 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 PRSS53Q2L4Q9 553 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 KANK2Q63ZY3 851 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 ACSM2BQ68CK6 577 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 FAM180BQ6P0A1 224 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 CYP4Z2PQ8N1L4 340 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TMEM178AQ8NBL3 297 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 OR2T11Q8NH01 316 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 C16orf78Q8WTQ4 265 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 RIT1Q92963 219 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 CNRIP1Q96F85 164 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 C5orf34Q96MH7 638 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 ZNF681Q96N22 645 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 PELOQ9BRX2 385 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 CNPPD1Q9BV87 410 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 COPS7AQ9UBW8 275 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 DLGAP4Q9Y2H0 992 aa10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 NCOA6Q14686 2063 aaPredicted RBP10.18□□□□□ -0.78
SHKBP1-206ENST00000595523 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 A0A1W2PRS3 328 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 NPIPB8E9PQR5 432 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 AZIN1O14977 448 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 RGS16O15492 202 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 NPHS1O60500 1241 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 GUCY1B2O75343 617 aa10.17□□□□□ -0.78
SHKBP1-206ENST00000595523 ERAL1O75616 437 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms