RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 COX7A2P14406 83 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 GPX3P22352 226 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 PLIN5Q00G26 463 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 DCAF10Q5QP82 559 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 CCDC116Q8IYX3 515 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 SAMD14Q8IZD0 417 aaPredicted RBP21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 LRRC25Q8N386 305 aaPredicted RBP21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 CIDECQ96AQ7 238 aaPredicted RBP21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 TESCQ96BS2 214 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 LPAR4Q99677 370 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 TUBB6Q9BUF5 446 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 NSRP1Q9H0G5 558 aaKnown RBP21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 ZNF385DQ9H6B1 395 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 CLMPQ9H6B4 373 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 MAPRE3Q9UPY8 281 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 MED13Q9UHV7 2174 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 NSG1A0A0A6YYJ2 146 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 HPP00738 406 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 GALNSP34059 522 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 SOX18P35713 384 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 FRKP42685 505 aaPredicted RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 ZFP36L2P47974 494 aaKnown RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 TERF2Q15554 542 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 CPTPQ5TA50 214 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PIGWQ7Z7B1 504 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 MIER2Q8N344 545 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 VPS50Q96JG6 964 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PELOQ9BRX2 385 aaKnown RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 ZNF160Q9HCG1 818 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 ZIM2Q9NZV7 527 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PPIEQ9UNP9 301 aaKnown RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 TRIM33Q9UPN9 1127 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 ENTPD4Q9Y227 616 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 SAGE2PA6NJ88 616 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 C17orf105B2RV13 164 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 OR10H2O60403 315 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 SLC22A3O75751 556 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 NCF2P19878 526 aaPredicted RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 MPIP34949 423 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PTGER1P34995 402 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 GPR143P51810 404 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 CXADRP78310 365 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 Q0VFX4 171 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 DEFB109BQ30KR1 87 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PAOXQ6QHF9 649 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 OR9I1Q8NGQ6 314 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 RIT1Q92963 219 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 BBS4Q96RK4 519 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 PRPF18Q99633 342 aaKnown RBP21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 CXorf21Q9HAI6 301 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 GIMAP4Q9NUV9 329 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 MAN2B2Q9Y2E5 1009 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 CLCA3PQ9Y6N3 262 aa21.05■□□□□ 0.96
SNRNP70-204ENST00000595231 C9JVG2 144 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 TNNI3P19429 210 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 ATP4BP51164 291 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 CLNS1AP54105 237 aaKnown RBP21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 SLC26A5P58743 744 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 PHC1P78364 1004 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 MGAT2Q10469 447 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 PRICKLE4Q2TBC4 344 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 TMEM102Q8N9M5 508 aaPredicted RBP21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 OR8J2Q8NGG1 315 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 DOK4Q8TEW6 326 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 DAZLQ92904 295 aaKnown RBP21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 CRELD1Q96HD1 420 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 FER1L6-AS2Q96M78 137 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 AMDHD1Q96NU7 426 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 GLIPR2Q9H4G4 154 aa21.04■□□□□ 0.96
SNRNP70-204ENST00000595231 ARGFXA6NJG6 315 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 HRKO00198 91 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 PDPK1O15530 556 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 DDAH2O95865 285 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 CT62P0C5K7 136 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 WNT3P56703 355 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 IRX1P78414 480 aaPredicted RBP21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 LTB4RQ15722 352 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 SPRED3Q2MJR0 410 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 PGS1Q32NB8 556 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 SPANXN4Q5MJ08 99 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 PLAG1Q6DJT9 500 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 APCDD1LQ8NCL9 501 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 ADCY4Q8NFM4 1077 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 OR14A16Q8NHC5 309 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 CCT8L2Q96SF2 557 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 DUSP26Q9BV47 211 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 BHLHE41Q9C0J9 482 aaPredicted RBP21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 ATAD3AQ9NVI7 634 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 KCNMB2Q9Y691 235 aa21.03■□□□□ 0.96
SNRNP70-204ENST00000595231 SCN2BO60939 215 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 CELA2AP08217 269 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 CD1EP15812 388 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 NT5EP21589 574 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 NCBP2P52298 156 aaKnown RBP eCLIP21.02■□□□□ 0.961e-17■■□□□ 11.9
SNRNP70-204ENST00000595231 STX1BP61266 288 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 SRSF11Q05519 484 aaKnown RBP21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 MAP4K2Q12851 820 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 CHAF1BQ13112 559 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 FAM174BQ3ZCQ3 159 aa21.02■□□□□ 0.96
SNRNP70-204ENST00000595231 FUNDC1Q8IVP5 155 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms