RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 ISLR2Q6UXK2 745 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 LINC00696Q6ZRV3 163 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 RNF44Q7L0R7 432 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 PIGWQ7Z7B1 504 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 FNDC5Q8NAU1 212 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 ZNF740Q8NDX6 193 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 SRFBP1Q8NEF9 429 aaKnown RBP10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 OR8K5Q8NH50 307 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 ACTRT2Q8TDY3 377 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 THAP3Q8WTV1 239 aaPredicted RBP10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 C10orf82Q8WW14 230 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 SLC13A3Q8WWT9 602 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 CLIP3Q96DZ5 547 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 PPM1MQ96MI6 270 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 LMF1Q96S06 567 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 SARGQ9BW04 601 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 LRTM1Q9HBL6 345 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 DMRT3Q9NQL9 472 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 FARSBQ9NSD9 589 aaKnown RBP10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 MRGBPQ9NV56 204 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 VPS29Q9UBQ0 182 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 PLCL2Q9UPR0 1127 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 AP1M2Q9Y6Q5 423 aa10.83□□□□□ -0.68
CAPNS1-209ENST00000590049 A0A088AWK7 358 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 IGHV5-51A0A0C4DH38 117 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 SDHDO14521 159 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ADAM10O14672 748 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 LCMT2O60294 686 aaKnown RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 SRPX2O60687 465 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 CCDC22O60826 627 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 PEX11AO75192 247 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 SH3BGRLO75368 114 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 DCTN3O75935 186 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 NCF2P19878 526 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ZNF10P21506 573 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 HMGCS1Q01581 520 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 DMTNQ08495 405 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ACSM2AQ08AH3 577 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 PWP1Q13610 501 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 AP5B1Q2VPB7 878 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 SPIN4Q56A73 249 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 XKR7Q5GH72 579 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 TCTE1Q5JU00 501 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ACSM2BQ68CK6 577 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 HEPHL1Q6MZM0 1159 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 TRIM40Q6P9F5 258 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 C3P1Q6ZMU1 363 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 PAGE2Q7Z2X7 111 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 MAVSQ7Z434 540 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 SPATA19Q7Z5L4 167 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ANKRD53Q8N9V6 530 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 TTC29Q8NA56 475 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 METTL2AQ96IZ6 378 aaKnown RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 QRFPRQ96P65 431 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 EBF4Q9BQW3 602 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 ACPTQ9BZG2 426 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 CHRNA10Q9GZZ6 450 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 TUBB1Q9H4B7 451 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 WDR55Q9H6Y2 383 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 COPS7BQ9H9Q2 264 aaPredicted RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 KCNK13Q9HB14 408 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 C1orf109Q9NX04 203 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 EIF3LQ9Y262 564 aaKnown RBP10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 TMED5Q9Y3A6 229 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 PTGDR2Q9Y5Y4 395 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 DOCK10Q96BY6 2186 aa10.82□□□□□ -0.68
CAPNS1-209ENST00000590049 DYTNA2CJ06 578 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 A6NNC1 897 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 E9PBE3 544 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 H0YGG7 62 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 CLDN4O14493 209 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 ZNF195O14628 629 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 UBDO15205 165 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 ZSCAN9O15535 394 aaPredicted RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 CTSVO60911 334 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 WISP2O76076 250 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 SEMA3DO95025 777 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 JUNP05412 331 aaKnown RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 SERPINA6P08185 405 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 ABOP16442 354 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 CD53P19397 219 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 FOLR3P41439 243 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 TNFSF10P50591 281 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 VSX2P58304 361 aaPredicted RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 ARF3P61204 181 aaPredicted RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 ERVK-8P63133 956 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 RPL38P63173 70 aaKnown RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 SKP1P63208 163 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 IRX1P78414 480 aaPredicted RBP10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 DEFA6Q01524 100 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 CUL3Q13618 768 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 NDUFA9Q16795 377 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 SMU1Q2TAY7 513 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 DEFB110Q30KQ9 67 aa10.81□□□□□ -0.68
CAPNS1-209ENST00000590049 LSM12Q3MHD2 195 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms