RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 HS3ST3B1Q9Y662 390 aa14.21□□□□□ -0.13
ATG4D-211ENST00000589753 LOC102723996A0A087X1L8 192 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 PRSS51A0A1B0GVH4 220 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 DYTNA2CJ06 578 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 A8MUA0 341 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 RNASET2O00584 256 aaKnown RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 SOCS6O14544 535 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 CFLARO15519 480 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 CD1EP15812 388 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 TNNI3P19429 210 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 EFNA1P20827 205 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 NT5EP21589 574 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 GALNSP34059 522 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 EIF2S3P41091 472 aaKnown RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 MANFP55145 182 aaKnown RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 MLC1Q15049 377 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 MAPRE2Q15555 327 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 ELAVL1Q15717 326 aaKnown RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 CPZQ66K79 652 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 UNQ6494/PRO21346Q6UXR6 183 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 MSANTD1Q6ZTZ1 278 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 PPP1R32Q7Z5V6 425 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 TSPEARQ8WU66 669 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 RIT1Q92963 219 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 VPS33AQ96AX1 596 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 C8orf44Q96CB5 159 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 ERP27Q96DN0 273 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 VPS50Q96JG6 964 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 CCNL2Q96S94 520 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-211ENST00000589753 MESP1Q9BRJ9 268 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 RMND5AQ9H871 391 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 CCDC88CQ9P219 2028 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 WDFY3Q8IZQ1 3526 aa14.2□□□□□ -0.14
ATG4D-211ENST00000589753 SPTBN2O15020 2390 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 IGHV3-20A0A0C4DH32 117 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 C17orf105B2RV13 164 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 RRP8O43159 456 aaKnown RBP14.19□□□□□ -0.14
ATG4D-211ENST00000589753 DYRK3O43781 588 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 SCN2BO60939 215 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 SNRPB2P08579 225 aaKnown RBP14.19□□□□□ -0.14
ATG4D-211ENST00000589753 CAPN3P20807 821 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 EEF1A2Q05639 463 aaKnown RBP14.19□□□□□ -0.14
ATG4D-211ENST00000589753 LRRC74AQ0VAA2 488 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 HSPB3Q12988 150 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 VPS26BQ4G0F5 336 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 C6orf163Q5TEZ5 329 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 KIRREL2Q6UWL6 708 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 DGAT2L6Q6ZPD8 337 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF551Q7Z340 670 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-211ENST00000589753 ANKRD46Q86W74 232 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 TREML1Q86YW5 311 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 GALNT12Q8IXK2 581 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 OR9A2Q8NGT5 310 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 ADAMTS17Q8TE56 1095 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 OR5P2Q8WZ92 322 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 LPAR4Q99677 370 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 SLC25A23Q9BV35 468 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 SLC52A3Q9NQ40 469 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 BTNL2Q9UIR0 455 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 PCDHGB4Q9UN71 923 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 CLCA3PQ9Y6N3 262 aa14.19□□□□□ -0.14
ATG4D-211ENST00000589753 IGHV1-45A0A0A0MS14 117 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 LOC100653049A0A140TA62 436 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 A0A1W2PP18 115 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 A0A1W2PQ72 361 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF891A8MT65 544 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 CAPN14A8MX76 684 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 PEX12O00623 359 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 ANGPT2O15123 496 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 KRT34O76011 436 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 SEC24DO94855 1032 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 SLITRK5O94991 958 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 C6orf47O95873 294 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 COX6A1P12074 109 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 WT1P19544 449 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 PTGER1P34995 402 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 GPC1P35052 558 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 CYLC2Q14093 348 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 PCOLCEQ15113 449 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 TERF2Q15554 542 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 LTB4RQ15722 352 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 MAPKAPK3Q16644 382 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 SPRED3Q2MJR0 410 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 PRICKLE4Q2TBC4 344 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF628Q5EBL2 1059 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 FAM91A1Q658Y4 838 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 PAPD4Q6PIY7 484 aaKnown RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 MRGPREQ86SM8 312 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 SNX32Q86XE0 403 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 SPACA3Q8IXA5 215 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 CLECL1Q8IZS7 167 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 FITM2Q8N6M3 262 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 ADCY4Q8NFM4 1077 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 OR11G2Q8NGC1 345 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 OR4A15Q8NGL6 344 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 OR14A16Q8NHC5 309 aa14.18□□□□□ -0.14
ATG4D-211ENST00000589753 RP9Q8TA86 221 aaKnown RBP14.18□□□□□ -0.14
ATG4D-211ENST00000589753 ZNF675Q8TD23 568 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms