RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 NME5P56597 212 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 CLDN8P56748 225 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 RIMKLAQ8IXN7 391 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 LRRC25Q8N386 305 aaPredicted RBP17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 OR7A2PQ8NGA2 310 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 DAZLQ92904 295 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 PPCDCQ96CD2 204 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 ZNF764Q96H86 408 aaPredicted RBP17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 SIKE1Q9BRV8 207 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 GIMAP4Q9NUV9 329 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 ATP6V1HQ9UI12 483 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 GPR45Q9Y5Y3 372 aa17.71■□□□□ 0.43
CLPTM1-209ENST00000588855 A6NL46 340 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 HRKO00198 91 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 ANKRD28O15084 1053 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 UBDO15205 165 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 PRPS1L1P21108 318 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 NT5EP21589 574 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 ITGA3P26006 1051 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 LSP1P33241 339 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 CCL11P51671 97 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 GNGT1P63211 74 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 LTB4RQ15722 352 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 CEBPEQ15744 281 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 EXT1Q16394 746 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 MPEG1Q2M385 716 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 R3HCC1LQ7Z5L2 792 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 KBTBD2Q8IY47 623 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 GALNT16Q8N428 558 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 B3GNT7Q8NFL0 401 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 SUN3Q8TAQ9 357 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 CIDECQ96AQ7 238 aaPredicted RBP17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 MTERF3Q96E29 417 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 CHMP6Q96FZ7 201 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 THOC3Q96J01 351 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 BBS4Q96RK4 519 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 DPY30Q9C005 99 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 BRINP2Q9C0B6 783 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 SLAMF7Q9NQ25 335 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 SH3BP4Q9P0V3 963 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 PPIEQ9UNP9 301 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 CACNA1BQ00975 2339 aa17.7■□□□□ 0.42
CLPTM1-209ENST00000588855 MYO1GB0I1T2 1018 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 PDPK1O15530 556 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 DDAH2O95865 285 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 ATP1B1P05026 303 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 SERPINA7P05543 415 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 CT62P0C5K7 136 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 ITGAMP11215 1152 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 RPL3P39023 403 aaKnown RBP17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 SEC24CP53992 1094 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 C21orf58P58505 322 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 RAPSNQ13702 412 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 SPRED3Q2MJR0 410 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 CCDC116Q8IYX3 515 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 SAMD14Q8IZD0 417 aaPredicted RBP17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 KIF2BQ8N4N8 673 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF321PQ8N8H1 164 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 APCDD1LQ8NCL9 501 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 MORN4Q8NDC4 146 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 M1APQ8TC57 530 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 SLC2A12Q8TD20 617 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 STON2Q8WXE9 905 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 RIT1Q92963 219 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 NCLNQ969V3 563 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 TMEM120AQ9BXJ8 343 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 OR8D2Q9GZM6 311 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 CXorf21Q9HAI6 301 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 BOD1L1Q8NFC6 3051 aa17.69■□□□□ 0.42
CLPTM1-209ENST00000588855 LAMP1P11279 417 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 ICAM2P13598 275 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 IDO1P14902 403 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 NTSP30990 170 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 GALNSP34059 522 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 GPR143P51810 404 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 POLE2P56282 527 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 SOX8P57073 446 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 UFM1P61960 85 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF267Q14586 743 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 LINC00303Q3SY05 128 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 GALNT12Q8IXK2 581 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 FAM9CQ8IZT9 166 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 ADCY4Q8NFM4 1077 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 OR9A2Q8NGT5 310 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 TTC9Q92623 222 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 TEX37Q96LM6 180 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 CNPPD1Q9BV87 410 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 LHPPQ9H008 270 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 MMP25Q9NPA2 562 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 ERVK-19Q9WJR5 959 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 PIEZO2Q9H5I5 2752 aa17.68■□□□□ 0.42
CLPTM1-209ENST00000588855 DYRK3O43781 588 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 NCBP2P52298 156 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 GSTA3Q16772 222 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 PRICKLE4Q2TBC4 344 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 PDCD4Q53EL6 469 aaKnown RBP17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 CPTPQ5TA50 214 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 FAM111BQ6SJ93 734 aa17.67■□□□□ 0.42
CLPTM1-209ENST00000588855 FDCSPQ8NFU4 85 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms