RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 SCUBE1Q8IWY4 988 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 SHISA5Q8N114 240 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 C16orf78Q8WTQ4 265 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 TM4SF18Q96CE8 201 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 FER1L6-AS2Q96M78 137 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 CSF3RQ99062 836 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 CRB3Q9BUF7 120 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 VN1R1Q9GZP7 353 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 NSRP1Q9H0G5 558 aaKnown RBP13.92□□□□□ -0.18
HDAC5-207ENST00000588261 RPF2Q9H7B2 306 aaKnown RBP13.92□□□□□ -0.18
HDAC5-207ENST00000588261 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 ATG4BQ9Y4P1 393 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 POLR3HQ9Y535 204 aaPredicted RBP13.92□□□□□ -0.18
HDAC5-207ENST00000588261 PCDHA9Q9Y5H5 950 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 SVILO95425 2214 aa13.92□□□□□ -0.18
HDAC5-207ENST00000588261 IGKV3D-11A0A0A0MRZ8 115 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 A0A1W2PR48 441 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 IDSB3KWA1 339 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 PRMT3O60678 531 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TBX19O60806 448 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 DIAPH2O60879 1101 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 CTNSO60931 367 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 DNAJB6O75190 326 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 AIFM1O95831 613 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 GBAP04062 536 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 HEXBP07686 556 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 BCKDHAP12694 445 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 SDC1P18827 310 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 MMP11P24347 488 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 ELAVL4P26378 380 aaKnown RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 EPHA3P29320 983 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 AQP5P55064 265 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TAS2R50P59544 299 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 IGLV3-21P80748 117 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 RHAGQ02094 409 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 SERTAD2Q14140 314 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 SLC9B1Q4ZJI4 515 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 NDUFAF5Q5TEU4 345 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 FAM71E1Q6IPT2 247 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TMEM205Q6UW68 189 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 IGFL2Q6UWQ7 119 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 SAMD14Q8IZD0 417 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TMEM132CQ8N3T6 1108 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 CLEC1AQ8NC01 280 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TM9SF4Q92544 642 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 MTERF3Q96E29 417 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 EBPLQ9BY08 206 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 SOX17Q9H6I2 414 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 PRTFDC1Q9NRG1 225 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 MRGBPQ9NV56 204 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 TEX10Q9NXF1 929 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 KLHL14Q9P2G3 628 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 C19orf25Q9UFG5 118 aaPredicted RBP13.91□□□□□ -0.18
HDAC5-207ENST00000588261 C3orf18Q9UK00 162 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 PSME2Q9UL46 239 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 MKL2Q9ULH7 1088 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 DLGAP4Q9Y2H0 992 aa13.91□□□□□ -0.18
HDAC5-207ENST00000588261 CROCCQ5TZA2 2017 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 LOC102723996A0A087X1L8 192 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 IL3P08700 152 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 DDCP20711 480 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.18
HDAC5-207ENST00000588261 IDH3AP50213 366 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 EFNA3P52797 238 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 EMP2P54851 167 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 PER3P56645 1201 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 GNGT1P63211 74 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 MINDY4Q4G0A6 757 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 IL23RQ5VWK5 629 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 SLC48A1Q6P1K1 146 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
HDAC5-207ENST00000588261 CLNKQ7Z7G1 428 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 METTL21AQ8WXB1 218 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 PPP1R36Q96LQ0 422 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 PELOQ9BRX2 385 aaKnown RBP13.9□□□□□ -0.18
HDAC5-207ENST00000588261 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
HDAC5-207ENST00000588261 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 AGPAT4Q9NRZ5 378 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 TAS2R7Q9NYW3 318 aa13.9□□□□□ -0.18
HDAC5-207ENST00000588261 COPG1Q9Y678 874 aaKnown RBP13.9□□□□□ -0.18
HDAC5-207ENST00000588261 TCRBV16S1A1N1A0A5B0 115 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 PEX12O00623 359 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 B4GALT2O60909 372 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 JRKO75564 520 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 C8orf89P0DMQ9 161 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 IDO1P14902 403 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 ITGA3P26006 1051 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 SLC13A2Q13183 592 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 TERF2Q15554 542 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 GSTA3Q16772 222 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
HDAC5-207ENST00000588261 MFSD4BQ5TF39 518 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 C18orf63Q68DL7 685 aa13.89□□□□□ -0.19
HDAC5-207ENST00000588261 R3HCC1LQ7Z5L2 792 aaKnown RBP13.89□□□□□ -0.19
HDAC5-207ENST00000588261 LAPTM4BQ86VI4 370 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms