RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CCDC22O60826 627 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 SEC24DO94855 1032 aaPredicted RBP12.74□□□□□ -0.37
VMP1-203ENST00000586245 ATP1B1P05026 303 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 IL6P05231 212 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 LAMP1P11279 417 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 IL12AP29459 219 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 S100A3P33764 101 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 GALNSP34059 522 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 KIR3DL1P43629 444 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.379e-8■□□□□ 10.2
VMP1-203ENST00000586245 POLR2JP52435 117 aaKnown RBP12.74□□□□□ -0.37
VMP1-203ENST00000586245 MANFP55145 182 aaKnown RBP12.74□□□□□ -0.37
VMP1-203ENST00000586245 ATP1A4Q13733 1029 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 PCOLCEQ15113 449 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 AGKQ53H12 422 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 ATP1A1-AS1Q5TC04 95 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 NDUFAF7Q7L592 441 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 CPSF7Q8N684 471 aaKnown RBP12.74□□□□□ -0.37
VMP1-203ENST00000586245 VPS37AQ8NEZ2 397 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 OR14A16Q8NHC5 309 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 CIDECQ96AQ7 238 aaPredicted RBP12.74□□□□□ -0.37
VMP1-203ENST00000586245 ART5Q96L15 291 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 FER1L6-AS2Q96M78 137 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 TUBB6Q9BUF5 446 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 FBXL4Q9UKA2 621 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 POLHQ9Y253 713 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 SCN2AQ99250 2005 aa12.74□□□□□ -0.37
VMP1-203ENST00000586245 APC2O95996 2303 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 CCDC88CQ9P219 2028 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 A0A1W2PRB8 838 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 FAM234BA2RU67 622 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 C17orf105B2RV13 164 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 C9JVG2 144 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 NDUFAB1O14561 156 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 HPP00738 406 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 COX6A1P12074 109 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 ITPKBP27987 946 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 PGDP52209 483 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 RRADP55042 308 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 KCNK10P57789 538 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 TERF2Q15554 542 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 CEBPEQ15744 281 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 FAM174BQ3ZCQ3 159 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 CPZQ66K79 652 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 OR8J2Q8NGG1 315 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 OR9I1Q8NGQ6 314 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 NUDT8Q8WV74 236 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 RIT1Q92963 219 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 AMDHD1Q96NU7 426 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 MESP1Q9BRJ9 268 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 ZNF385DQ9H6B1 395 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 ZNF160Q9HCG1 818 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 SAR1AQ9NR31 198 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 ACSS1Q9NUB1 689 aaPredicted RBP12.73□□□□□ -0.37
VMP1-203ENST00000586245 FAM120CQ9NX05 1096 aaKnown RBP12.73□□□□□ -0.37
VMP1-203ENST00000586245 MAN2B2Q9Y2E5 1009 aa12.73□□□□□ -0.37
VMP1-203ENST00000586245 K7ENP7 123 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 RNASET2O00584 256 aaKnown RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 FCHO1O14526 889 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 PGRP06401 933 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 ICAM2P13598 275 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 ADSLP30566 484 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 GPC1P35052 558 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 FRKP42685 505 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 DGKQP52824 942 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 DUSP2Q05923 314 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 VAC14Q08AM6 782 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 HSPB3Q12988 150 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 ZNF267Q14586 743 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 LTB4RQ15722 352 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 EXT1Q16394 746 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 MPEG1Q2M385 716 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 VWA5B2Q8N398 1253 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 TMEM102Q8N9M5 508 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 CLEC1AQ8NC01 280 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 CCDC197Q8NCU1 140 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 MORN4Q8NDC4 146 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 SUN3Q8TAQ9 357 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 PTPMT1Q8WUK0 201 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 OR5P2Q8WZ92 322 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 OR52E6Q96RD3 313 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
VMP1-203ENST00000586245 CNPPD1Q9BV87 410 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 NMUR2Q9GZQ4 415 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 CXorf21Q9HAI6 301 aa12.72□□□□□ -0.37
VMP1-203ENST00000586245 CPNE5Q9HCH3 593 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms