RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 OR7G3Q8NG95 312 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 NUBPLQ8TB37 319 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 PYROXD1Q8WU10 500 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 SPACA9Q96E40 222 aaPredicted RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 EFCAB11Q9BUY7 163 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 CD244Q9BZW8 370 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 CLEC4MQ9H2X3 399 aaPredicted RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 EPB41L4BQ9H329 900 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 ALG9Q9H6U8 611 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 RPF2Q9H7B2 306 aaKnown RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 SAYSD1Q9NPB0 183 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 COPS7AQ9UBW8 275 aa10.68□□□□□ -0.7
LIG3-207ENST00000586119 CHCHD2Q9Y6H1 151 aaPredicted RBP10.68□□□□□ -0.7
LIG3-207ENST00000586119 NIPBLQ6KC79 2804 aaeCLIP10.68□□□□□ -0.7
LIG3-207ENST00000586119 EXPH5Q8NEV8 1989 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 UBXN8O00124 270 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 PLPP1O14494 284 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 EEDO75530 441 aaKnown RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 SCELO95171 688 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 C1QAP02745 245 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 BMP5P22003 454 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 ECHS1P30084 290 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 SSR2P43308 183 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 MAGEA4P43358 317 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 ADAM8P78325 824 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 ILF2Q12905 390 aaKnown RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 DUSP8Q13202 625 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 LAPTM5Q13571 262 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 E2F2Q14209 437 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 RCN2Q14257 317 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 TBCCQ15814 346 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 SLC25A35Q3KQZ1 300 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 KHDRBS2Q5VWX1 349 aaKnown RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 DESI1Q6ICB0 168 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 WDR93Q6P2C0 686 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 MED27Q6P2C8 311 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 Q71RC1 249 aaPredicted RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 CMC1Q7Z7K0 106 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 GPR180Q86V85 440 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 LRRC25Q8N386 305 aaPredicted RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 NEIL3Q8TAT5 605 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 LINC01560Q8TB33 94 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 RBM18Q96H35 190 aaKnown RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 UBXN10Q96LJ8 280 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 GAL3ST4Q96RP7 486 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 GPR22Q99680 433 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 TIMP4Q99727 224 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 SMR3AQ99954 134 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 SH3GL2Q99962 352 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 ANKZF1Q9H8Y5 726 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 CNOT10Q9H9A5 744 aaKnown RBP10.67□□□□□ -0.7
LIG3-207ENST00000586119 DMRT3Q9NQL9 472 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 CBLCQ9ULV8 474 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 RNF112Q9ULX5 631 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 NFU1Q9UMS0 254 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 SLC6A5Q9Y345 797 aa10.67□□□□□ -0.7
LIG3-207ENST00000586119 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 C15orf38-AP3S2A0A0A6YYH1 394 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 A0A1W2PR48 441 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 PGRMC2O15173 223 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 TMPRSS11DO60235 418 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 FBXO45P0C2W1 286 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CT62P0C5K7 136 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 GABRA1P14867 456 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ALOX15P16050 662 aaPredicted RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 STMN1P16949 149 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 SSTR4P31391 388 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CEACAM8P31997 349 aaPredicted RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 ZNF136P52737 540 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 SLC37A1P57057 533 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 FBXW4P57775 412 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 GPX6P59796 221 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ATP6V0D1P61421 351 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 RPS13P62277 151 aaKnown RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 CRYZQ08257 329 aaKnown RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 TMEM35AQ53FP2 167 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 PAGE2BQ5JRK9 111 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CDKL4Q5MAI5 379 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 DCST1Q5T197 706 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 FNDC7Q5VTL7 733 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 FAM219BQ5XKK7 198 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 PLXDC2Q6UX71 529 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CHSY3Q70JA7 882 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CCDC25Q86WR0 208 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 FBXW8Q8N3Y1 598 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 SRFBP1Q8NEF9 429 aaKnown RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 MYRIPQ8NFW9 859 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 HUS1BQ8NHY5 278 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 SLC22A8Q8TCC7 542 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 NINJ1Q92982 152 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 CMTM7Q96FZ5 175 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 GNRHR2Q96P88 292 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ATOH8Q96SQ7 321 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 MTERF1Q99551 399 aaKnown RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 RBBP8Q99708 897 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ZNF717Q9BY31 904 aaPredicted RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 WWTR1Q9GZV5 400 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ACKR4Q9NPB9 350 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 DLL4Q9NR61 685 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms