RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 POFUT2Q9Y2G5 429 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 LYVE1Q9Y5Y7 322 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 CEPT1Q9Y6K0 416 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 SPACA6W5XKT8 324 aa10.65□□□□□ -0.7
LIG3-204ENST00000585740 PTPRZ1P23471 2315 aaPredicted RBP10.65□□□□□ -0.7
LIG3-204ENST00000585740 TRBV23OR9-2A0A075B6M9 112 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ZSCAN9O15535 394 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 B3GALT2O43825 422 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SLC28A2O43868 658 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ERAL1O75616 437 aaKnown RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR6B1O95007 311 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OPN1SWP03999 348 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 BCHEP06276 602 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CD72P21854 359 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CRHBPP24387 322 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 EEF1B2P24534 225 aaKnown RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 TLX1P31314 330 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 PIGAP37287 484 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 XCR1P46094 333 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 HMGA2P52926 109 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CRISP3P54108 245 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CASP9P55211 416 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CDH15P55291 814 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SMIM11AP58511 58 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 RAB8AP61006 207 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ISL1P61371 349 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CSNK2BP67870 215 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 IL5RAQ01344 420 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CD47Q08722 323 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 FZD2Q14332 565 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ARMC6Q6NXE6 501 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 Q6ZS52 159 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 FAM92BQ6ZTR7 304 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ASCL5Q7RTU5 278 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 PARGQ86W56 976 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SLC22A18ASQ8N1D0 253 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 GALNT15Q8N3T1 639 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR10G2Q8NGC3 310 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR4C15Q8NGM1 316 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR10G6Q8NH81 332 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ZNF420Q8TAQ5 688 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 MIPOL1Q8TD10 442 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SLC38A5Q8WUX1 472 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SHDQ96IW2 340 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR2A5Q96R48 311 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ZFYVE21Q9BQ24 234 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 BTBD2Q9BX70 525 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 NPLQ9BXD5 320 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 ADNPQ9H2P0 1102 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CHRDQ9H2X0 955 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 OR51I1Q9H343 314 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 TRIM45Q9H8W5 580 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 ZNF556Q9HAH1 456 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 LYRM4Q9HD34 91 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 BCL2L10Q9HD36 194 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CALML5Q9NZT1 146 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 C5AR2Q9P296 337 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 TRPC4Q9UBN4 977 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 PNMA8BQ9ULN7 279 aaPredicted RBP10.64□□□□□ -0.71
LIG3-204ENST00000585740 TPRKBQ9Y3C4 175 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 ATG4BQ9Y4P1 393 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 PCDHGA8Q9Y5G5 932 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 GMPPBQ9Y5P6 360 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 SNX5Q9Y5X3 404 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 NINQ8N4C6 2090 aa10.64□□□□□ -0.71
LIG3-204ENST00000585740 CACNA1HO95180 2353 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 IGHV1OR15-9A0A0B4J2B8 117 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 C4orf51C9J302 202 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 HMGN4O00479 90 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 PGRMC2O15173 223 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 PPM1DO15297 605 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 ASNA1O43681 348 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 PRAMEF10O60809 474 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 NOL3O60936 208 aaKnown RBP10.63□□□□□ -0.71
LIG3-204ENST00000585740 NDUFS2O75306 463 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 MFN2O95140 757 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 CPNE6O95741 557 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 AGR2O95994 175 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 IFI6P09912 130 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 ZNF888P0CJ79 500 aaPredicted RBP10.63□□□□□ -0.71
LIG3-204ENST00000585740 NR2F1P10589 423 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 HOXB3P14651 431 aaPredicted RBP10.63□□□□□ -0.71
LIG3-204ENST00000585740 ETS2P15036 469 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 MAGP20916 626 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 CD247P20963 164 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 CPN2P22792 545 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 ELK4P28324 431 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 AVPR2P30518 371 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 PXNP49023 591 aaPredicted RBP10.63□□□□□ -0.71
LIG3-204ENST00000585740 CLK3P49761 638 aaKnown RBP10.63□□□□□ -0.71
LIG3-204ENST00000585740 CDH12P55289 794 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 IL1RL1Q01638 556 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 TNFRSF17Q02223 184 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 NPRL3Q12980 569 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 TUBA3CQ13748 450 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 MICAQ29983 383 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 ANKRD34AQ69YU3 496 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 FCRL6Q6DN72 434 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 KLHL35Q6PF15 583 aa10.63□□□□□ -0.71
LIG3-204ENST00000585740 KCTD8Q6ZWB6 473 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms