RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 IDH3AP50213 366 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 NEK2P51955 445 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 RAP1GDS1P52306 607 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 NAGLUP54802 743 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 CDH13P55290 713 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 TAS2R50P59544 299 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ARG2P78540 354 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SLC13A2Q13183 592 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 TUBA3CQ13748 450 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 MEP1AQ16819 746 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SH2D4BQ5SQS7 431 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF324BQ6AW86 544 aaPredicted RBP8.05□□□□□ -1.12
ATG4D-202ENST00000585437 FCRLBQ6BAA4 426 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 TUBA3EQ6PEY2 450 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 EPGNQ6UW88 154 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 NUDT13Q86X67 352 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 CISD2Q8N5K1 135 aaKnown RBP8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SLC5A8Q8N695 610 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF781Q8N8C0 355 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ANKRD9Q96BM1 317 aaPredicted RBP8.05□□□□□ -1.12
ATG4D-202ENST00000585437 VMP1Q96GC9 406 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SCMH1Q96GD3 660 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 TAAR6Q96RI8 345 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SERPINI1Q99574 410 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SLX1AQ9BQ83 275 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 CCDC106Q9BWC9 280 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 SLC29A3Q9BZD2 475 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 C1orf21Q9H246 121 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 BRF2Q9HAW0 419 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 TCF7L2Q9NQB0 619 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ARL8BQ9NVJ2 186 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 LYARQ9NX58 379 aaKnown RBP8.05□□□□□ -1.12
ATG4D-202ENST00000585437 PLA2G3Q9NZ20 509 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 BAIAP2L1Q9UHR4 511 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ADAM29Q9UKF5 820 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ATG4BQ9Y4P1 393 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 ASB4Q9Y574 426 aa8.05□□□□□ -1.12
ATG4D-202ENST00000585437 DOPEY2Q9Y3R5 2298 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 USP9YO00507 2555 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 NCKAP5O14513 1909 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TMEM200CA6NKL6 621 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 GABRR3A8MPY1 467 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 A8MUI8 341 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PROM1O43490 865 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PRAMEF2O60811 474 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 LDB3O75112 727 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 VPS4BO75351 444 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PRKRAO75569 313 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 NEURL1O76050 574 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 SUPT7LO94864 414 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 OR4F21O95013 312 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 DDAH2O95865 285 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PDYNP01213 254 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ENO1P06733 434 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 HSD3B1P14060 373 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 GNLYP22749 145 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 CPN2P22792 545 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 HSD3B2P26439 372 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TPP2P29144 1249 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TRHRP34981 398 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 BUD31P41223 144 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 STT3AP46977 705 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 CLCN2P51788 898 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TDGF1P3P51864 188 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 MLF1P58340 268 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 IRX1P78414 480 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TBL3Q12788 808 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 CSTF3Q12996 717 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 LCP2Q13094 533 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 SLAMF1Q13291 335 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 SERTAD2Q14140 314 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 FAM219BQ5XKK7 198 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 C18orf63Q68DL7 685 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 MILR1Q7Z6M3 343 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 GPR180Q86V85 440 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 RPS19BP1Q86WX3 136 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF227Q86WZ6 799 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 METTL4Q8N3J2 472 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 TMEM132CQ8N3T6 1108 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 CCNYL1Q8N7R7 359 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 MORN4Q8NDC4 146 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ST6GALNAC3Q8NDV1 305 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 C7orf57Q8NEG2 295 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 OR1N1Q8NGS0 311 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 OR14A16Q8NHC5 309 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 GRHL3Q8TE85 626 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 AGAP11Q8TF27 550 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PTPMT1Q8WUK0 201 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 FAR1Q8WVX9 515 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 NCLNQ969V3 563 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ATP6V1E2Q96A05 226 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 C11orf24Q96F05 449 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 SIGLEC12Q96PQ1 595 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 EBF4Q9BQW3 602 aa8.04□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 FARSBQ9NSD9 589 aaKnown RBP8.04□□□□□ -1.12
ATG4D-202ENST00000585437 PNPOQ9NVS9 261 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms