RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TAF8Q7Z7C8 310 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NOXA1Q86UR1 476 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DAW1Q8N136 415 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 METTL27Q8N6F8 245 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PCDH20Q8N6Y1 951 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM216AQ8WUB2 273 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SHC3Q92529 594 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PROX1Q92786 737 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RIT1Q92963 219 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CD101Q93033 1021 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ST6GALNAC6Q969X2 333 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TSACCQ96A04 125 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM143Q96AN5 459 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PYCR2Q96C36 320 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGED4Q96JG8 741 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PRICKLE1Q96MT3 831 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF582Q96NG8 517 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DUX3Q96PT4 197 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ALS2CR12Q96Q35 445 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM110AQ9BQ89 295 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PPP1R3EQ9H7J1 279 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLK4Q9HAZ1 481 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MARCH5Q9NX47 278 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CHCHD3Q9NX63 227 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PTTG2Q9NZH5 202 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LIPGQ9Y5X9 500 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SPIN1Q9Y657 262 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLIC4Q9Y696 253 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CSNK1G3Q9Y6M4 447 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PLXND1Q9Y4D7 1925 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TENM4Q6N022 2769 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NCOR1O75376 2440 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 A0A1W2PPM1 405 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 HYKKA2RU49 373 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CTAGE9A4FU28 777 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 A8MUI8 341 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 E5RGE8 158 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 J3QR06 171 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EEF2KO00418 725 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PSTPIP1O43586 416 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SOCS5O75159 536 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NEURL1O76050 574 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EPN2O95208 641 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CH25HO95992 272 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 HLA-DRAP01903 254 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF806P0C7X5 589 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CYP2A6P11509 494 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SFTPCP11686 197 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 POLR2CP19387 275 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CYP2A7P20853 494 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ANOS1P23352 680 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PCSK6P29122 969 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CCR1P32246 355 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SFTPDP35247 375 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TRPC1P48995 793 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SERPINH1P50454 418 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ASCL1P50553 236 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CLCNKAP51800 687 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 AP1S1P61966 158 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SARNPP82979 210 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CDK3Q00526 305 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CDK16Q00536 496 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CDR2Q01850 454 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ST3GAL1Q11201 340 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MYBPHQ13203 477 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SNX1Q13596 522 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 HTR4Q13639 388 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SPA17Q15506 151 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 RBBP7Q16576 425 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PHKG1Q16816 387 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 VWC2Q2TAL6 325 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF789Q5FWF6 425 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PPP6R3Q5H9R7 873 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM122CQ6P4D5 195 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF474Q6S9Z5 364 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LINGO4Q6UY18 593 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C18orf65Q6ZTR6 163 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 DEFB128Q7Z7B8 93 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FJX1Q86VR8 437 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKRD46Q86W74 232 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM71AQ8IYT1 594 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 EIF1ADQ8N9N8 165 aaKnown RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FBXO30Q8TB52 745 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGEC3Q8TD91 643 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC13A3Q8WWT9 602 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF641Q96N77 438 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PKMYT1Q99640 499 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZPBPQ9BS86 351 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MED10Q9BTT4 135 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CACNG6Q9BXT2 260 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 GSDMCQ9BYG8 508 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 KRTAP9-8Q9BYQ0 159 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 VPS37BQ9H9H4 285 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 POPDC2Q9HBU9 364 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 GKN1Q9NS71 199 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MAN1B1Q9UKM7 699 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 B3GALT5Q9Y2C3 310 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 NSG2Q9Y328 171 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MCM3APO60318 1980 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MAST4O15021 2626 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms