RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 BCL2L2Q92843 193 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 GLYATL1Q969I3 302 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 PNPLA2Q96AD5 504 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 TSPYL1Q9H0U9 437 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 SLC25A19Q9HC21 320 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 CUTCQ9NTM9 273 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 TAS2R16Q9NYV7 291 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 ARMCX1Q9P291 453 aa3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 NOL7Q9UMY1 257 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-204ENST00000581226 MEI4A8MW99 385 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 MCF2LO15068 1137 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 LRRTM2O43300 516 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 KBTBD11O94819 623 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 IGKV3-15P01624 115 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 FCGR3AP08637 254 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 CCDC159P0C7I6 412 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 FERP16591 822 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 GEMP55040 296 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 ABRAXAS2Q15018 415 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 KRT31Q15323 416 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 ANKRD55Q3KP44 614 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 MPPE1Q53F39 396 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 UNC50Q53HI1 259 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 WDR25Q64LD2 544 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 RTL6Q6ICC9 239 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 ABRAXAS1Q6UWZ7 409 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 RELL2Q8NC24 303 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 FUNDC2Q9BWH2 189 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 GANQ9H2C0 597 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 DCLRE1BQ9H816 532 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 IL1RL2Q9HB29 575 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 ZCCHC3Q9NUD5 404 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 CWC25Q9NXE8 425 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 SNX5Q9Y5X3 404 aa3.48□□□□□ -1.85
SMCHD1-204ENST00000581226 KIF7Q2M1P5 1343 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 C5orf51A6NDU8 294 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ZNF487B1APH4 448 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 E2F3O00716 465 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 SRPX2O60687 465 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ZNF253O75346 499 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 PIGRP01833 764 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 THY1P04216 161 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 UCP2P55851 309 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 TRA2BP62995 288 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 HERV-K104P63124 156 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 CDKL1Q00532 357 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 C17orf67Q0P5P2 114 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 RUNX3Q13761 415 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 Q1RN00 199 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 SLC22A6Q4U2R8 563 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ODF2Q5BJF6 829 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ATAD3CQ5T2N8 411 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 BAIAP2L2Q6UXY1 529 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 SERINC5Q86VE9 423 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ZNF491Q8N8L2 437 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 OR4A16Q8NH70 328 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ST7LQ8TDW4 575 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 NTNG2Q96CW9 530 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 MRPL53Q96EL3 112 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 C5orf30Q96GV9 206 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 MRPL9Q9BYD2 267 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 ABCC13Q9NSE7 274 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 SEC14L4Q9UDX3 406 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 SLC6A5Q9Y345 797 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 NAALAD2Q9Y3Q0 740 aa3.47□□□□□ -1.85
SMCHD1-204ENST00000581226 POGZQ7Z3K3 1410 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 K7ERI5 159 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 TSPAN2O60636 221 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 RTN2O75298 545 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 IGHG3P01860 377 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 FCER2P06734 321 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 TKTL1P51854 596 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 IST1P53990 364 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 HMGCS2P54868 508 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 SLC12A3P55017 1021 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 PDE7AQ13946 482 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 C17orf58Q2M2W7 97 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 CNPY1Q3B7I2 92 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 STEAP1BQ6NZ63 245 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF584Q8IVC4 421 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ZBED8Q8IZ13 594 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 LINC00518Q8N0U6 118 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 PSMA8Q8TAA3 256 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 FLVCR1-AS1Q8TAF5 88 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 COG3Q96JB2 828 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 RPGRIP1Q96KN7 1286 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 MCCC1Q96RQ3 725 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ALDH8A1Q9H2A2 487 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 RNF41Q9H4P4 317 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 Q9HAA7 133 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ACOXLQ9NUZ1 547 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 DNAJC11Q9NVH1 559 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF446Q9NWS9 450 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 ABCD2Q9UBJ2 740 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 DIMT1Q9UNQ2 313 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 RNF24Q9Y225 148 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms