RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	RUVBL2	Q9Y230	463 aa	Known RBP	5.41	□□□□□ -1.54
KPNB1-209	ENST00000580158	RNF115	Q9Y4L5	304 aa		5.41	□□□□□ -1.54
KPNB1-209	ENST00000580158	CLCA3P	Q9Y6N3	262 aa		5.41	□□□□□ -1.54
KPNB1-209	ENST00000580158	UQCRHL	A0A096LP55	91 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	IGKV3D-11	A0A0A0MRZ8	115 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	SYNDIG1L	A6NDD5	238 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	GFY	I3L273	518 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CLOCK	O15516	846 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	GALR3	O60755	368 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TNFSF13	O75888	250 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	HPN	P05981	417 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CD3E	P07766	207 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	RNH1	P13489	461 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	APEH	P13798	732 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CPN1	P15169	458 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	KDELR1	P24390	212 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	MSN	P26038	577 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PTPN6	P29350	595 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CCKAR	P32238	428 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	GRK3	P35626	688 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	SLC6A12	P48065	614 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CDK9	P50750	372 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PNLIPRP1	P54315	467 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	RPS26	P62854	115 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	SRY	Q05066	204 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	FOXL1	Q12952	345 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PRPSAP1	Q14558	356 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	FXN	Q16595	210 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	BBS9	Q3SYG4	887 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	DEFB134	Q4QY38	66 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	ODF2	Q5BJF6	829 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	LCE5A	Q5TCM9	118 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CAPN13	Q6MZZ7	669 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	LRFN4	Q6PJG9	635 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	ENPP6	Q6UWR7	440 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	NPNT	Q6UXI9	565 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	RANBP10	Q6VN20	620 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	VN1R4	Q7Z5H5	301 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PEG10	Q86TG7	708 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	GPSM1	Q86YR5	675 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	DND1	Q8IYX4	353 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	FAM13C	Q8NE31	585 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	NUP43	Q8NFH3	380 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	OR8K3	Q8NH51	312 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PAQR8	Q8TEZ7	354 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	STYX	Q8WUJ0	223 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	DAZL	Q92904	295 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	STARD4	Q96DR4	205 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TM4SF19	Q96DZ7	209 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	ZNF845	Q96IR2	970 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CCDC138	Q96M89	665 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	OLFM3	Q96PB7	478 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PANX3	Q96QZ0	392 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PKP2	Q99959	881 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TUBA1C	Q9BQE3	449 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	APOL2	Q9BQE5	337 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TACO1	Q9BSH4	297 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	KRTAP4-5	Q9BYR2	181 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	OPN3	Q9H1Y3	402 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	RHBG	Q9H310	441 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	CLK4	Q9HAZ1	481 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	NGB	Q9NPG2	151 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	MED29	Q9NX70	200 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	FEZ2	Q9UHY8	353 aa	Predicted RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	PTBP2	Q9UKA9	531 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	TRHDE	Q9UKU6	1024 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	AAR2	Q9Y312	384 aa	Known RBP	5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	MMACHC	Q9Y4U1	282 aa		5.4	□□□□□ -1.54
KPNB1-209	ENST00000580158	HEATR1	Q9H583	2144 aa	Known RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	PRKDC	P78527	4128 aa	Known RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	KRT87P	A6NCN2	255 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	URAD	A6NGE7	173 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	LRRC3C	A6NJW4	275 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	C3orf70	A6NLC5	250 aa	Predicted RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	TPD52L2	O43399	206 aa	Known RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	OR1I1	O60431	355 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	IFNA16	P05015	189 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	THBD	P07204	575 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	RBP3	P10745	1247 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	ERG	P11308	486 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	ALOX12	P18054	663 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	PCMT1	P22061	227 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	EEF1G	P26641	437 aa	Known RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	AOAH	P28039	575 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	FOXN2	P32314	431 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	NR2C2	P49116	596 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	RNF4	P78317	190 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	CLC	Q05315	142 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	WASHC5	Q12768	1159 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	MSLN	Q13421	630 aa	Predicted RBP	5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	GGTLC2	Q14390	218 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	FGFBP1	Q14512	234 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	C21orf62-AS1	Q17RA5	79 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	MPEG1	Q2M385	716 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	PIGG	Q5H8A4	983 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	TCP11X2	Q5H9J9	407 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	AGAP6	Q5VW22	663 aa		5.39	□□□□□ -1.55
KPNB1-209	ENST00000580158	SLC9A4	Q6AI14	798 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms